Protein–RNA interactions for Protein: Q13011

ECH1, Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1Q13011 AL139156.1-201ENST00000412785 841 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 AC074117.2-201ENST00000417130 397 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 PGBD4P6-201ENST00000421501 610 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.72□□□□□ -2.13
ECH1Q13011 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.72□□□□□ -2.13
ECH1Q13011 AC000111.3-201ENST00000433478 193 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 RPL23AP3-201ENST00000453844 468 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
ECH1Q13011 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.72□□□□□ -2.13
ECH1Q13011 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.72□□□□□ -2.13
ECH1Q13011 RNU6-759P-201ENST00000516740 103 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 RNU6-232P-201ENST00000517144 64 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 AC106038.2-201ENST00000520706 568 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.72□□□□□ -2.13
ECH1Q13011 MIR4529-201ENST00000578110 78 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.72□□□□□ -2.13
ECH1Q13011 AL031274.2-201ENST00000599419 203 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 AL096840.1-201ENST00000603287 93 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 AC093424.1-201ENST00000604999 338 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 Y_RNA.783-201ENST00000613546 102 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.72□□□□□ -2.13
ECH1Q13011 AC093648.1-201ENST00000623546 606 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 AL359740.1-201ENST00000624340 592 ntBASIC1.72□□□□□ -2.13
ECH1Q13011 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
ECH1Q13011 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
ECH1Q13011 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
ECH1Q13011 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ECH1Q13011 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
ECH1Q13011 U3.13-201ENST00000364804 214 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 SNORA67.3-201ENST00000384366 140 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AL023284.1-201ENST00000403956 276 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 RNA5SP450-201ENST00000411206 102 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.71□□□□□ -2.14
ECH1Q13011 RPL21P90-201ENST00000415692 466 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.71□□□□□ -2.14
ECH1Q13011 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.71□□□□□ -2.14
ECH1Q13011 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.71□□□□□ -2.14
ECH1Q13011 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.71□□□□□ -2.14
ECH1Q13011 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.71□□□□□ -2.14
ECH1Q13011 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.71□□□□□ -2.14
ECH1Q13011 MTCYBP1-201ENST00000454315 1119 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 snoU13.14-201ENST00000459372 104 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AL121594.1-201ENST00000475906 575 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 MTCO3P9-201ENST00000506989 781 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.71□□□□□ -2.14
ECH1Q13011 RNU6-586P-201ENST00000517265 104 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.71□□□□□ -2.14
ECH1Q13011 RANP3-201ENST00000530970 276 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.71□□□□□ -2.14
ECH1Q13011 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AC007229.1-201ENST00000590455 412 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AL360219.1-201ENST00000610230 366 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
ECH1Q13011 SCARNA4-202ENST00000625402 129 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 AC019226.2-201ENST00000625973 424 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.71□□□□□ -2.14
ECH1Q13011 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
ECH1Q13011 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ECH1Q13011 RNU6-234P-201ENST00000365229 104 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 RNU6-1274P-201ENST00000384557 107 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 Y_RNA.576-201ENST00000384781 102 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC019129.1-201ENST00000403786 261 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 SNORA11.2-201ENST00000408318 127 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 RNA5SP390-201ENST00000410191 113 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 RNU2-23P-201ENST00000410545 195 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 RNU2-8P-201ENST00000410727 190 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.7□□□□□ -2.14
ECH1Q13011 OOSP1P1-201ENST00000423265 274 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.7□□□□□ -2.14
ECH1Q13011 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ECH1Q13011 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.7□□□□□ -2.14
ECH1Q13011 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.7□□□□□ -2.14
ECH1Q13011 AL513124.1-201ENST00000450410 614 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 BZW1P2-201ENST00000473537 826 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 RPS29P21-201ENST00000496272 170 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 HMGB1P35-201ENST00000503360 598 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 MTCYBP35-201ENST00000503630 1137 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC116562.3-201ENST00000506136 177 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC092436.1-201ENST00000506450 503 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 MTND1P22-201ENST00000510572 951 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 CYCSP27-201ENST00000527643 293 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC068587.5-201ENST00000528506 175 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.7□□□□□ -2.14
ECH1Q13011 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.7□□□□□ -2.14
ECH1Q13011 MIR4760-201ENST00000585040 80 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC073539.2-201ENST00000597113 165 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.7□□□□□ -2.14
ECH1Q13011 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.7□□□□□ -2.14
ECH1Q13011 AC090578.1-201ENST00000604955 591 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.7□□□□□ -2.14
ECH1Q13011 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
ECH1Q13011 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.7□□□□□ -2.14
ECH1Q13011 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
ECH1Q13011 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ECH1Q13011 OR4G2P-201ENST00000328113 903 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms