Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 RNU6-143P-201ENST00000516942 93 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC026407.1-201ENST00000518369 204 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMARCB1Q12824 MIR1273C-201ENST00000578669 77 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 MIR3199-1-201ENST00000582434 88 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 MIR3935-201ENST00000583472 104 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMARCB1Q12824 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.91□□□□□ -2.1
SMARCB1Q12824 CLIC4P2-201ENST00000601934 717 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AL109918.3-201ENST00000603072 338 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC005296.1-201ENST00000616145 209 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC084768.2-201ENST00000622736 221 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 AC024940.5-201ENST00000622889 474 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 MIR7157-201ENST00000635801 60 ntBASIC1.91□□□□□ -2.1
SMARCB1Q12824 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.9□□□□□ -2.1
SMARCB1Q12824 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SMARCB1Q12824 MIR578-201ENST00000384828 96 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 MIR218-1-201ENST00000384999 110 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 MIR301A-201ENST00000385261 86 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 RNU2-39P-201ENST00000410604 198 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC127391.1-201ENST00000411737 98 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 MTND3P17-201ENST00000416968 344 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC016831.2-201ENST00000417179 352 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC137499.1-201ENST00000427602 88 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL353706.1-201ENST00000436728 494 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL078601.1-201ENST00000444542 271 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL583843.1-201ENST00000456070 346 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 SNORD42A-201ENST00000459584 64 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 BET1P1-201ENST00000482276 359 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 RPL23AP63-201ENST00000498752 471 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC098862.1-201ENST00000504991 413 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC112206.3-201ENST00000514578 389 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 SNORA25.11-201ENST00000515935 105 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC007834.2-201ENST00000536310 343 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 OR11H5P-201ENST00000554039 926 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 MIR3913-1-201ENST00000577744 102 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 MIR4782-201ENST00000577987 79 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC008521.1-201ENST00000587471 187 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AC174048.1-201ENST00000603389 144 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL158032.1-201ENST00000605401 106 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 AL133173.2-201ENST00000614270 90 ntBASIC1.9□□□□□ -2.11
SMARCB1Q12824 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCB1Q12824 Y_RNA.33-201ENST00000362591 102 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 SNORA16.1-201ENST00000364597 132 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCB1Q12824 RNU6-641P-201ENST00000384006 107 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 RNY3P10-201ENST00000384764 102 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AL133475.1-201ENST00000404414 305 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 RPL31P63-201ENST00000422565 375 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AL160275.3-201ENST00000423876 471 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 PTGES3P4-201ENST00000426243 356 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 RPL31P35-201ENST00000431058 377 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC000111.3-201ENST00000433478 193 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCB1Q12824 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC055731.1-201ENST00000474387 401 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC023194.1-201ENST00000493084 308 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC116655.1-201ENST00000508324 901 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 ACA59.2-201ENST00000517061 156 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 SCARNA3-201ENST00000517097 143 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC064872.1-201ENST00000604823 1072 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC068276.1-201ENST00000605793 379 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC022079.1-201ENST00000621546 602 ntBASIC1.89□□□□□ -2.11
SMARCB1Q12824 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms