Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AP001324.2-201ENST00000461163 319 ntBASIC0.5□□□□□ -2.33
HMGXB3Q12766 COX7A2P2-201ENST00000505291 250 ntBASIC0.5□□□□□ -2.33
HMGXB3Q12766 AC079140.2-201ENST00000506193 142 ntBASIC0.5□□□□□ -2.33
HMGXB3Q12766 SCARNA16.2-201ENST00000516520 172 ntBASIC0.5□□□□□ -2.33
HMGXB3Q12766 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGXB3Q12766 AL365204.3-201ENST00000612448 685 ntBASIC0.5□□□□□ -2.33
HMGXB3Q12766 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.5□□□□□ -2.33
HMGXB3Q12766 RPS27P16-201ENST00000425758 201 ntBASIC0.49□□□□□ -2.33
HMGXB3Q12766 SNORA25.11-201ENST00000515935 105 ntBASIC0.49□□□□□ -2.33
HMGXB3Q12766 SNORD116-28-201ENST00000516123 91 ntBASIC0.49□□□□□ -2.33
HMGXB3Q12766 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.49□□□□□ -2.33
HMGXB3Q12766 AC091152.3-201ENST00000604227 325 ntBASIC0.49□□□□□ -2.33
HMGXB3Q12766 AC004067.1-201ENST00000608733 700 ntBASIC0.49□□□□□ -2.33
HMGXB3Q12766 MIR8065-201ENST00000620577 100 ntBASIC0.49□□□□□ -2.33
HMGXB3Q12766 SNORD33-201ENST00000362761 85 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 AL121978.1-201ENST00000402778 359 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AL591034.2-201ENST00000402839 359 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 MIR1267-201ENST00000408723 78 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 RNA5SP100-201ENST00000410903 110 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 RNA5SP59-201ENST00000410922 110 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC069282.1-201ENST00000411911 526 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC244023.1-201ENST00000426884 112 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 SNORA3.4-201ENST00000515969 96 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 CENPUP1-201ENST00000526649 1202 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC012414.6-201ENST00000568241 401 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC008751.2-201ENST00000597885 980 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 BBIP1P1-201ENST00000602999 279 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC242498.1-201ENST00000604134 111 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC024257.5-201ENST00000612739 531 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC243994.1-201ENST00000618627 109 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC099654.5-201ENST00000636479 350 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC092125.1-201ENST00000562568 1995 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 ENSAP3-201ENST00000312710 333 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 RNU1-58P-201ENST00000362413 163 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 RNU6-414P-201ENST00000363705 104 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 RNU6-439P-201ENST00000384188 106 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AL031577.2-201ENST00000404133 280 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 RNU2-33P-201ENST00000410344 192 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 CCDC58P2-201ENST00000417131 366 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 RPL21P47-201ENST00000483696 477 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC073544.2-201ENST00000601155 540 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 AC069304.2-201ENST00000605154 435 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
HMGXB3Q12766 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.48□□□□□ -2.33
HMGXB3Q12766 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGXB3Q12766 MIR597-201ENST00000384968 97 ntBASIC0.47□□□□□ -2.33
HMGXB3Q12766 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HMGXB3Q12766 HSPE1P13-201ENST00000451143 297 ntBASIC0.47□□□□□ -2.33
HMGXB3Q12766 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.47□□□□□ -2.33
HMGXB3Q12766 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGXB3Q12766 CYCSP27-201ENST00000527643 293 ntBASIC0.47□□□□□ -2.33
HMGXB3Q12766 AP001180.6-201ENST00000584918 159 ntBASIC0.47□□□□□ -2.33
HMGXB3Q12766 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.47□□□□□ -2.33
HMGXB3Q12766 AF129408.1-201ENST00000608767 431 ntBASIC0.47□□□□□ -2.33
HMGXB3Q12766 AL590396.2-201ENST00000636511 1041 ntBASIC0.47□□□□□ -2.33
HMGXB3Q12766 AL117342.1-201ENST00000404861 406 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 AC127391.1-201ENST00000411737 98 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 PTGES3P4-201ENST00000426243 356 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 AL121578.1-201ENST00000428051 892 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 SNORD57-201ENST00000448188 72 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC0.46□□□□□ -2.34
HMGXB3Q12766 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.46□□□□□ -2.34
HMGXB3Q12766 AC114982.1-201ENST00000469402 321 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 RNU6-667P-201ENST00000517186 102 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.46□□□□□ -2.34
HMGXB3Q12766 AC012213.3-201ENST00000577199 777 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 AL713866.2-201ENST00000603579 219 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 MIR8063-201ENST00000621930 81 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 AC017037.3-201ENST00000625016 472 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HMGXB3Q12766 MTND4P16-201ENST00000466108 1367 ntBASIC0.46□□□□□ -2.34
HMGXB3Q12766 SEC63P2-201ENST00000503863 1939 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HMGXB3Q12766 MIR506-201ENST00000384998 124 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 RNU2-64P-201ENST00000411315 191 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 MTCYBP38-201ENST00000417160 1123 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 AC027119.1-201ENST00000440877 241 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 Y_RNA.654-201ENST00000497848 106 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 PSMC1P5-201ENST00000512850 177 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.45□□□□□ -2.34
HMGXB3Q12766 AL021879.1-201ENST00000611756 288 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 AC011939.3-201ENST00000613686 466 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.45□□□□□ -2.34
HMGXB3Q12766 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.45□□□□□ -2.34
HMGXB3Q12766 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HMGXB3Q12766 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.45□□□□□ -2.34
HMGXB3Q12766 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
HMGXB3Q12766 RNU6-1126P-201ENST00000384002 107 ntBASIC0.44□□□□□ -2.34
HMGXB3Q12766 Y_RNA.453-201ENST00000384223 109 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms