Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSRP1Q08945 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 RNU6-227P-201ENST00000362865 103 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 SNORA70.4-201ENST00000365509 134 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 RNU6-639P-201ENST00000384074 107 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 RNU6-738P-201ENST00000384531 106 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 RN7SKP111-201ENST00000410349 271 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 MCFD2P1-201ENST00000417812 300 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 EIF4EP2-201ENST00000422816 654 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 HMGN2P31-201ENST00000432430 273 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 AL591043.1-201ENST00000432461 424 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 AL714022.1-201ENST00000439897 151 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 AC022447.4-201ENST00000504053 364 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 AC110768.1-201ENST00000509222 400 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 RNU6-120P-201ENST00000516077 103 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 RNU6-1045P-201ENST00000516321 107 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 IGKV2-26-201ENST00000518305 343 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 CBX3P8-201ENST00000532412 525 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.96□□□□□ -1.78
SSRP1Q08945 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.96□□□□□ -1.78
SSRP1Q08945 SUB1P3-201ENST00000564581 315 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.96□□□□□ -1.78
SSRP1Q08945 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 SNORA51-201ENST00000606420 132 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 MIR3199-2-201ENST00000636243 86 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.96□□□□□ -1.78
SSRP1Q08945 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SSRP1Q08945 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SSRP1Q08945 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.96□□□□□ -1.78
SSRP1Q08945 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.96□□□□□ -1.78
SSRP1Q08945 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SSRP1Q08945 AC010680.1-201ENST00000590024 3590 ntBASIC3.96□□□□□ -1.78
SSRP1Q08945 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSRP1Q08945 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SSRP1Q08945 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SSRP1Q08945 SNORA71.3-201ENST00000362582 128 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 Y_RNA.148-201ENST00000363557 117 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AC117470.1-201ENST00000381974 330 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 Y_RNA.428-201ENST00000384078 102 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 SNORD116-20-201ENST00000384529 92 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 FTH1P15-201ENST00000406984 280 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.95□□□□□ -1.78
SSRP1Q08945 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.95□□□□□ -1.78
SSRP1Q08945 RPS4XP2-201ENST00000458402 793 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 RNU7-23P-201ENST00000459465 62 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 RPS29P27-201ENST00000463711 170 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 MRPL42P6-201ENST00000486397 371 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AC116655.1-201ENST00000508324 901 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 SNORA70.14-201ENST00000516205 110 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 RNU6-581P-201ENST00000516214 105 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 MIR2276-201ENST00000516886 89 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AC107934.2-201ENST00000518653 310 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AC023442.1-201ENST00000531247 422 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.95□□□□□ -1.78
SSRP1Q08945 AC006199.1-201ENST00000548728 219 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.95□□□□□ -1.78
SSRP1Q08945 U3.45-201ENST00000607547 219 ntBASIC3.95□□□□□ -1.78
SSRP1Q08945 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.95□□□□□ -1.78
SSRP1Q08945 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.95□□□□□ -1.78
SSRP1Q08945 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.94□□□□□ -1.78
SSRP1Q08945 AC066616.2-201ENST00000559334 1481 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 AP001148.1-201ENST00000624124 2359 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 Y_RNA.48-201ENST00000362710 103 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 RNA5SP197-201ENST00000363357 119 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 U3.6-201ENST00000363622 211 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SNORA63C-201ENST00000364578 129 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 MIR184-201ENST00000384962 84 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.94□□□□□ -1.78
SSRP1Q08945 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.94□□□□□ -1.78
SSRP1Q08945 AC008267.5-201ENST00000424928 265 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 AL353997.1-201ENST00000432936 108 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 AP002884.2-201ENST00000471647 395 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 RPL17P19-201ENST00000489069 552 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 FCF1P8-201ENST00000510322 597 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SNORA31.1-201ENST00000515993 133 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SNORA31.5-201ENST00000516190 133 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SNORD116.3-201ENST00000517176 78 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 CR383656.8-201ENST00000549046 145 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.94□□□□□ -1.78
SSRP1Q08945 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.94□□□□□ -1.78
SSRP1Q08945 AC005014.2-201ENST00000607795 599 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 AC097372.5-201ENST00000623665 376 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 AC058791.1-201ENST00000608412 3198 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.94□□□□□ -1.78
SSRP1Q08945 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SSRP1Q08945 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSRP1Q08945 MTND5P9-201ENST00000503854 1755 ntBASIC3.94□□□□□ -1.78
SSRP1Q08945 AL356274.2-201ENST00000624379 3752 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms