Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 RNU6-600P-201ENST00000362524 99 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 Y_RNA.136-201ENST00000363444 102 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORD115-8-201ENST00000363856 82 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORD115-38-201ENST00000365037 82 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORD113-1-201ENST00000365321 69 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORA46.1-201ENST00000391069 153 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORD66.1-201ENST00000391230 76 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 FTH1P15-201ENST00000406984 280 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDH1Q08174 AL358075.3-201ENST00000426289 226 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 snoU13.1-201ENST00000459157 104 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 RN7SL459P-201ENST00000481078 302 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 AP001025.1-201ENST00000486139 332 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORA40.9-201ENST00000515895 93 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 SNORA27.4-201ENST00000516650 95 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 RNA5SP73-201ENST00000516744 108 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 AC006064.5-201ENST00000541782 248 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH1Q08174 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDH1Q08174 MIR4697-201ENST00000582977 78 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.19□□□□□ -1.74
PCDH1Q08174 AC005255.1-201ENST00000593748 216 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PCDH1Q08174 U6.106-201ENST00000636360 105 ntBASIC4.19□□□□□ -1.74
PCDH1Q08174 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.19□□□□□ -1.74
PCDH1Q08174 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDH1Q08174 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH1Q08174 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH1Q08174 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH1Q08174 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 RNU6-1289P-201ENST00000384431 106 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 U3.19-201ENST00000390893 196 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 RNA5SP332-201ENST00000391063 115 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 RN7SKP61-201ENST00000410642 295 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 RN7SKP51-201ENST00000410781 304 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 AC004552.1-201ENST00000419089 348 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 VDAC1P3-201ENST00000434069 851 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 POLR2KP2-201ENST00000438155 177 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AC007395.1-201ENST00000451333 677 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH1Q08174 RPS26P3-201ENST00000470205 348 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AC090543.2-201ENST00000483963 348 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AC004057.1-201ENST00000485827 348 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 RN7SKP122-201ENST00000515923 296 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.18□□□□□ -1.74
PCDH1Q08174 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.18□□□□□ -1.74
PCDH1Q08174 KLKP1-201ENST00000595979 403 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 AC113403.1-201ENST00000604910 193 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 MIR432-201ENST00000606207 94 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PCDH1Q08174 AC006001.4-201ENST00000622243 395 ntBASIC4.18□□□□□ -1.74
PCDH1Q08174 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH1Q08174 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PCDH1Q08174 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.18□□□□□ -1.74
PCDH1Q08174 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PCDH1Q08174 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDH1Q08174 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.17□□□□□ -1.74
PCDH1Q08174 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RNA5SP175-201ENST00000364275 119 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 Y_RNA.233-201ENST00000364407 101 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 Y_RNA.291-201ENST00000364886 113 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 Y_RNA.331-201ENST00000365267 102 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 AL133412.1-201ENST00000380194 2992 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RNY1P5-201ENST00000383890 115 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RNU6-918P-201ENST00000391219 106 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 ELOCP19-201ENST00000411919 318 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 NDUFS5P4-201ENST00000412983 318 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 SETP5-201ENST00000437270 562 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.17□□□□□ -1.74
PCDH1Q08174 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 MRPS10P1-201ENST00000448483 130 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RPL21P104-201ENST00000464143 478 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RPL35AP15-201ENST00000468042 339 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RN7SL810P-201ENST00000493031 276 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 AL592156.1-201ENST00000508758 304 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 SNORA31.23-201ENST00000517219 133 ntBASIC4.17□□□□□ -1.74
PCDH1Q08174 RPL21P9-201ENST00000556149 474 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms