Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.33□□□□□ -2.04
SCN1BQ07699 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.33□□□□□ -2.04
SCN1BQ07699 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 snoU13.14-201ENST00000459372 104 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AC018868.1-201ENST00000491307 315 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.33□□□□□ -2.04
SCN1BQ07699 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.33□□□□□ -2.04
SCN1BQ07699 HMGB1P29-201ENST00000505659 499 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AC108078.1-201ENST00000508073 725 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.33□□□□□ -2.04
SCN1BQ07699 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
SCN1BQ07699 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN1BQ07699 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.33□□□□□ -2.04
SCN1BQ07699 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SCN1BQ07699 AL137161.1-201ENST00000532231 390 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AGGF1P4-201ENST00000568249 801 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 MTND1P15-201ENST00000579262 949 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 AC005609.4-201ENST00000625071 447 ntBASIC2.33□□□□□ -2.04
SCN1BQ07699 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
SCN1BQ07699 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.33□□□□□ -2.04
SCN1BQ07699 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.32□□□□□ -2.04
SCN1BQ07699 RNU6-266P-201ENST00000364225 107 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 RNU6-996P-201ENST00000365438 107 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 MIR544A-201ENST00000384855 91 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 RNU4-55P-201ENST00000410731 137 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 EDDM3CP-201ENST00000415977 425 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN1BQ07699 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SCN1BQ07699 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.32□□□□□ -2.04
SCN1BQ07699 RPL39P29-201ENST00000447779 157 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 AC073415.1-201ENST00000449240 153 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN1BQ07699 RPS29P26-201ENST00000477483 171 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SCN1BQ07699 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.32□□□□□ -2.04
SCN1BQ07699 RNU6-377P-201ENST00000515965 102 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 SNORA25.17-201ENST00000517184 124 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.32□□□□□ -2.04
SCN1BQ07699 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.32□□□□□ -2.04
SCN1BQ07699 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.32□□□□□ -2.04
SCN1BQ07699 AC091135.1-201ENST00000585943 307 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 AC004223.2-201ENST00000590309 544 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 AL136363.2-201ENST00000604173 851 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 AL354685.2-201ENST00000448218 1447 ntBASIC2.32□□□□□ -2.04
SCN1BQ07699 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN1BQ07699 AC096644.4-201ENST00000563417 2912 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 snoU2_19.1-201ENST00000362361 80 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 Y_RNA.51-201ENST00000362725 102 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 SNORA18.3-201ENST00000384122 132 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN1BQ07699 CBX3P9-201ENST00000402326 552 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AF274854.1-201ENST00000413236 615 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 SNORD56-201ENST00000413522 71 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN1BQ07699 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.31□□□□□ -2.04
SCN1BQ07699 AL353752.1-201ENST00000454946 260 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AL122001.1-201ENST00000457027 370 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN1BQ07699 SLC25A15P5-201ENST00000508033 253 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN1BQ07699 AC091133.4-201ENST00000511142 308 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 SNORA70.24-201ENST00000517233 118 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AC034114.1-201ENST00000520293 285 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN1BQ07699 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN1BQ07699 AC022880.1-201ENST00000534017 973 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN1BQ07699 RPS3AP23-202ENST00000574601 686 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 PIGPP4-201ENST00000584447 307 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.31□□□□□ -2.04
SCN1BQ07699 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.31□□□□□ -2.04
SCN1BQ07699 ELOCP5-201ENST00000604924 333 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 Z82243.1-201ENST00000609432 473 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AL442067.2-201ENST00000614033 363 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AL354950.2-201ENST00000617939 290 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 AL159153.1-201ENST00000619688 317 ntBASIC2.31□□□□□ -2.04
SCN1BQ07699 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SCN1BQ07699 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SCN1BQ07699 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SCN1BQ07699 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SCN1BQ07699 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SCN1BQ07699 RNU6-1158P-201ENST00000391167 107 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 RNU6-1245P-201ENST00000411130 106 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 RPLP0P7-201ENST00000416050 667 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AC087499.2-201ENST00000432861 149 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SCN1BQ07699 AL031274.1-201ENST00000450334 232 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 CACYBPP2-201ENST00000453625 678 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AP003392.2-201ENST00000527269 208 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.3□□□□□ -2.04
SCN1BQ07699 AC087241.2-201ENST00000535801 324 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN1BQ07699 MTCO3P23-201ENST00000561363 289 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AC233702.2-202ENST00000562547 291 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.3□□□□□ -2.04
SCN1BQ07699 MIR4635-201ENST00000583759 79 ntBASIC2.3□□□□□ -2.04
SCN1BQ07699 AC012507.3-201ENST00000603556 477 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms