Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 Y_RNA.22-201ENST00000362492 102 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 U8.3-201ENST00000363321 132 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RNU6-529P-201ENST00000363383 104 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 SNORA64-201ENST00000384674 134 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 MIR578-201ENST00000384828 96 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 MIR518A2-201ENST00000384966 87 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RN7SKP32-201ENST00000410167 303 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RNA5SP450-201ENST00000411206 102 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RPS3AP3-201ENST00000411933 242 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AL158823.1-201ENST00000418441 478 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 PGBD4P6-201ENST00000421501 610 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 DPH3P2-201ENST00000422618 250 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AC096920.1-201ENST00000423991 241 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AC008267.5-201ENST00000424928 265 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RNU2-53P-201ENST00000516257 147 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 Vault.3-201ENST00000516676 95 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RANP3-201ENST00000530970 276 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 CR383656.8-201ENST00000549046 145 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AC137800.2-201ENST00000574375 120 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 BNIP3P30-201ENST00000601184 574 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 AC005296.1-201ENST00000616145 209 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.96□□□□□ -2.1
TNFRSF17Q02223 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
TNFRSF17Q02223 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 RNU6-179P-201ENST00000363350 107 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 MIR186-201ENST00000384988 86 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 SNORA40.3-201ENST00000390964 122 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AL023284.1-201ENST00000403956 276 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 HMGN1P14-201ENST00000412459 517 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 CYCSP46-201ENST00000423569 204 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AC006026.2-201ENST00000457376 180 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AC010486.2-201ENST00000505572 483 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 MTND1P22-201ENST00000510572 951 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AP000873.5-201ENST00000533906 236 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AL138889.2-201ENST00000603883 242 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 APOOP1-201ENST00000604695 592 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 U6.42-201ENST00000618440 107 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 AL359740.1-201ENST00000624340 592 ntBASIC1.95□□□□□ -2.1
TNFRSF17Q02223 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
TNFRSF17Q02223 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 SNORD14B-201ENST00000364533 90 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 RNU6-61P-201ENST00000365528 109 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 RNU6-1032P-201ENST00000384100 107 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 MIR29C-201ENST00000385231 88 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 SNORA26.8-201ENST00000391306 124 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC073614.1-201ENST00000438690 650 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AL022238.1-201ENST00000442557 355 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AL021397.1-201ENST00000451806 248 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 SNRPGP9-201ENST00000456025 225 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 snoU109.1-201ENST00000459339 135 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 snoU13.15-201ENST00000459407 104 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC091965.2-201ENST00000512324 613 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC145350.1-201ENST00000567426 208 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 MIR4299-201ENST00000577899 72 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC008521.1-201ENST00000587471 187 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC243960.4-201ENST00000600532 288 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC009314.1-201ENST00000603871 304 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AL603755.1-201ENST00000619504 163 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AP000770.2-201ENST00000623694 100 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.94□□□□□ -2.1
TNFRSF17Q02223 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
TNFRSF17Q02223 AC092881.1-201ENST00000638218 2733 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TNFRSF17Q02223 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 RNU6-72P-201ENST00000384285 79 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 MIR504-201ENST00000385065 83 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 AL356432.1-201ENST00000405809 419 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 UBE2V1P10-201ENST00000414685 269 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 RPL31P35-201ENST00000431058 377 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 MTATP6P16-201ENST00000434543 526 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.93□□□□□ -2.1
TNFRSF17Q02223 AL445567.1-201ENST00000439121 144 ntBASIC1.93□□□□□ -2.1
TNFRSF17Q02223 CALM1P1-201ENST00000442082 433 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms