Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.92□□□□□ -2.26
CCL20P78556 U8.2-201ENST00000363156 134 ntBASIC0.91□□□□□ -2.26
CCL20P78556 Y_RNA.510-201ENST00000384511 114 ntBASIC0.91□□□□□ -2.26
CCL20P78556 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
CCL20P78556 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CCL20P78556 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.91□□□□□ -2.26
CCL20P78556 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.91□□□□□ -2.26
CCL20P78556 CBX3P6-201ENST00000430257 527 ntBASIC0.91□□□□□ -2.26
CCL20P78556 TOMM22P2-201ENST00000430735 237 ntBASIC0.91□□□□□ -2.26
CCL20P78556 LARP1BP3-201ENST00000437229 869 ntBASIC0.91□□□□□ -2.26
CCL20P78556 MTND2P4-201ENST00000445034 1004 ntBASIC0.91□□□□□ -2.26
CCL20P78556 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.91□□□□□ -2.26
CCL20P78556 AC130509.1-201ENST00000464158 433 ntBASIC0.91□□□□□ -2.26
CCL20P78556 HMGN1P13-201ENST00000505795 138 ntBASIC0.91□□□□□ -2.26
CCL20P78556 AC119751.4-201ENST00000507498 357 ntBASIC0.91□□□□□ -2.26
CCL20P78556 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.91□□□□□ -2.26
CCL20P78556 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0.91□□□□□ -2.26
CCL20P78556 SNORA77B-201ENST00000578179 125 ntBASIC0.91□□□□□ -2.26
CCL20P78556 AC005786.1-201ENST00000588553 154 ntBASIC0.91□□□□□ -2.26
CCL20P78556 KC877982.1-201ENST00000602313 470 ntBASIC0.91□□□□□ -2.26
CCL20P78556 AC024940.5-201ENST00000622889 474 ntBASIC0.91□□□□□ -2.26
CCL20P78556 AC007792.1-201ENST00000623023 402 ntBASIC0.91□□□□□ -2.26
CCL20P78556 FRG1KP-201ENST00000623592 341 ntBASIC0.91□□□□□ -2.26
CCL20P78556 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCL20P78556 MIR412-201ENST00000362142 91 ntBASIC0.9□□□□□ -2.27
CCL20P78556 SNORD3E-201ENST00000362899 217 ntBASIC0.9□□□□□ -2.27
CCL20P78556 RNU6-112P-201ENST00000363599 104 ntBASIC0.9□□□□□ -2.27
CCL20P78556 SNORA22-201ENST00000383907 134 ntBASIC0.9□□□□□ -2.27
CCL20P78556 SNORD116-12-201ENST00000384468 92 ntBASIC0.9□□□□□ -2.27
CCL20P78556 SNORA22C-201ENST00000384614 134 ntBASIC0.9□□□□□ -2.27
CCL20P78556 RNU6-939P-201ENST00000384634 107 ntBASIC0.9□□□□□ -2.27
CCL20P78556 RNU6-298P-201ENST00000390888 96 ntBASIC0.9□□□□□ -2.27
CCL20P78556 SNORA40.6-201ENST00000391153 128 ntBASIC0.9□□□□□ -2.27
CCL20P78556 RSL24D1P4-201ENST00000400938 484 ntBASIC0.9□□□□□ -2.27
CCL20P78556 RNA5SP390-201ENST00000410191 113 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 RPS27P16-201ENST00000425758 201 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 AL627311.1-201ENST00000431514 115 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AL365400.1-201ENST00000431854 640 ntBASIC0.9□□□□□ -2.27
CCL20P78556 HMGB3P12-201ENST00000438745 556 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC079448.1-201ENST00000449377 373 ntBASIC0.9□□□□□ -2.27
CCL20P78556 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.9□□□□□ -2.27
CCL20P78556 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CCL20P78556 AP003122.4-201ENST00000530980 758 ntBASIC0.9□□□□□ -2.27
CCL20P78556 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCL20P78556 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.9□□□□□ -2.27
CCL20P78556 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.9□□□□□ -2.27
CCL20P78556 RRN3P3-201ENST00000549207 578 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 AC011494.1-201ENST00000596454 237 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC068620.3-201ENST00000602749 560 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC022022.2-201ENST00000602989 360 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC025754.2-201ENST00000606491 432 ntBASIC0.9□□□□□ -2.27
CCL20P78556 RNU6-88P-201ENST00000606801 100 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AL355816.2-201ENST00000610049 647 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC120349.3-201ENST00000624377 529 ntBASIC0.9□□□□□ -2.27
CCL20P78556 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 ICE2P2-201ENST00000483823 2787 ntBASIC0.9□□□□□ -2.27
CCL20P78556 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.27
CCL20P78556 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CCL20P78556 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CCL20P78556 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
CCL20P78556 SNORA25.8-201ENST00000364831 128 ntBASIC0.89□□□□□ -2.27
CCL20P78556 RNY3P13-201ENST00000365542 102 ntBASIC0.89□□□□□ -2.27
CCL20P78556 RNU6-769P-201ENST00000384407 104 ntBASIC0.89□□□□□ -2.27
CCL20P78556 MIR10A-201ENST00000385043 110 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AL590556.1-201ENST00000423231 483 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.89□□□□□ -2.27
CCL20P78556 AC092648.1-201ENST00000425870 423 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.89□□□□□ -2.27
CCL20P78556 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.89□□□□□ -2.27
CCL20P78556 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.89□□□□□ -2.27
CCL20P78556 RPL30P12-201ENST00000474666 353 ntBASIC0.89□□□□□ -2.27
CCL20P78556 RPS29P21-201ENST00000496272 170 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AC009646.1-201ENST00000510455 318 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AC108043.1-201ENST00000512696 574 ntBASIC0.89□□□□□ -2.27
CCL20P78556 RNU6-295P-201ENST00000516901 104 ntBASIC0.89□□□□□ -2.27
CCL20P78556 RNU6-1092P-201ENST00000516955 87 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.89□□□□□ -2.27
CCL20P78556 MIR544B-201ENST00000582372 78 ntBASIC0.89□□□□□ -2.27
CCL20P78556 MIR3660-201ENST00000584845 100 ntBASIC0.89□□□□□ -2.27
CCL20P78556 BNIP3P33-201ENST00000598912 569 ntBASIC0.89□□□□□ -2.27
CCL20P78556 BCRP9-201ENST00000605312 388 ntBASIC0.89□□□□□ -2.27
CCL20P78556 AL121895.2-201ENST00000619558 447 ntBASIC0.89□□□□□ -2.27
CCL20P78556 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.89□□□□□ -2.27
CCL20P78556 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CCL20P78556 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCL20P78556 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.89□□□□□ -2.27
CCL20P78556 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CCL20P78556 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
CCL20P78556 AP000560.1-201ENST00000624150 1937 ntBASIC0.88□□□□□ -2.27
CCL20P78556 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CCL20P78556 Y_RNA.192-201ENST00000363977 102 ntBASIC0.88□□□□□ -2.27
CCL20P78556 SNORD1A-201ENST00000364968 72 ntBASIC0.88□□□□□ -2.27
CCL20P78556 RNU6-946P-201ENST00000383878 107 ntBASIC0.88□□□□□ -2.27
CCL20P78556 UBE2V1P2-201ENST00000397758 440 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms