Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 MIR1273C-201ENST00000578669 77 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.9□□□□□ -2.11
CCNA1P78396 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 AC012493.3-201ENST00000604494 112 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 AC018714.1-201ENST00000605028 208 ntBASIC1.9□□□□□ -2.11
CCNA1P78396 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
CCNA1P78396 Y_RNA.33-201ENST00000362591 102 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 SNORD113-6-201ENST00000363345 75 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CCNA1P78396 RNU6-809P-201ENST00000384461 107 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 Y_RNA.534-201ENST00000384599 112 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.89□□□□□ -2.11
CCNA1P78396 AC006366.1-201ENST00000422002 759 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 EIF4EP2-201ENST00000422816 654 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AL606517.1-201ENST00000446914 387 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.89□□□□□ -2.11
CCNA1P78396 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.89□□□□□ -2.11
CCNA1P78396 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCNA1P78396 AC087884.1-201ENST00000469738 328 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 MED28P2-201ENST00000475771 317 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.89□□□□□ -2.11
CCNA1P78396 RPS3AP22-201ENST00000488297 769 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AC116347.2-201ENST00000514912 523 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 RNU6-415P-201ENST00000516252 97 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 RNU2-53P-201ENST00000516257 147 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.89□□□□□ -2.11
CCNA1P78396 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.89□□□□□ -2.11
CCNA1P78396 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.89□□□□□ -2.11
CCNA1P78396 AP000763.2-201ENST00000540641 163 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AC023050.2-201ENST00000544968 387 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AC104581.2-201ENST00000572227 430 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AP000811.1-201ENST00000603803 651 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 SEPT7P9-203ENST00000604116 343 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AC098614.4-201ENST00000607601 462 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AL050303.3-201ENST00000613704 284 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 MIR8070-201ENST00000616510 88 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 AL589994.2-201ENST00000621124 579 ntBASIC1.89□□□□□ -2.11
CCNA1P78396 RNU6-529P-201ENST00000363383 104 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 RNU6-487P-201ENST00000365430 104 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 RNU6-611P-201ENST00000384276 104 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 RNU6-166P-201ENST00000384371 107 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 MIR499A-201ENST00000384903 122 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 RPS20P2-201ENST00000402520 389 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 VN1R36P-201ENST00000414936 291 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.88□□□□□ -2.11
CCNA1P78396 GDI2P2-201ENST00000445131 608 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 AC009474.2-201ENST00000451383 136 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 AC027575.1-201ENST00000481064 460 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.88□□□□□ -2.11
CCNA1P78396 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.88□□□□□ -2.11
CCNA1P78396 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.88□□□□□ -2.11
CCNA1P78396 AC123904.2-201ENST00000548059 300 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.88□□□□□ -2.11
CCNA1P78396 AP000860.1-201ENST00000605250 559 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.88□□□□□ -2.11
CCNA1P78396 AC093788.1-201ENST00000609356 927 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.88□□□□□ -2.11
CCNA1P78396 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 uc_338.15-201ENST00000615470 191 ntBASIC1.88□□□□□ -2.11
CCNA1P78396 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.88□□□□□ -2.11
CCNA1P78396 SNORA25.9-201ENST00000365087 128 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 RNY3P13-201ENST00000365542 102 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 SNORD56-201ENST00000413522 71 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 RPL22P18-201ENST00000417197 377 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.87□□□□□ -2.11
CCNA1P78396 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 Z73417.1-201ENST00000447373 778 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 SNORD11.1-201ENST00000459482 85 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.87□□□□□ -2.11
CCNA1P78396 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCNA1P78396 RNU6-914P-201ENST00000516749 109 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 SNORA44.1-201ENST00000517031 108 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.87□□□□□ -2.11
CCNA1P78396 AC090888.2-201ENST00000559765 1144 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.87□□□□□ -2.11
CCNA1P78396 MIR4999-201ENST00000585029 91 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AC112187.2-201ENST00000604345 283 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AC144521.1-201ENST00000607148 956 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AC022893.3-201ENST00000607665 437 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.87□□□□□ -2.11
CCNA1P78396 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 AC092192.1-201ENST00000633154 1018 ntBASIC1.87□□□□□ -2.11
CCNA1P78396 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CCNA1P78396 RNY4P16-201ENST00000364768 94 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 RNU6-1032P-201ENST00000384100 107 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 FCF1P10-201ENST00000407590 479 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 RNU2-36P-201ENST00000410361 191 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.86□□□□□ -2.11
CCNA1P78396 AC008267.5-201ENST00000424928 265 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AL513185.2-201ENST00000425543 193 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.86□□□□□ -2.11
CCNA1P78396 TAF9P1-201ENST00000445421 515 ntBASIC1.86□□□□□ -2.11
CCNA1P78396 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.86□□□□□ -2.11
CCNA1P78396 TAF9P2-201ENST00000454958 515 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms