Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RNU6-718P-201ENST00000516166 105 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 AC109635.3-201ENST00000529536 185 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 AC023050.3-201ENST00000541142 333 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 AC021646.1-201ENST00000605469 484 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 DISC2.1-201ENST00000612827 205 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PRAMEP78395 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.74□□□□□ -1.97
PRAMEP78395 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PRAMEP78395 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.74□□□□□ -1.97
PRAMEP78395 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.74□□□□□ -1.97
PRAMEP78395 FER-210ENST00000628534 558 ntTSL 5 BASIC2.74□□□□□ -1.97
PRAMEP78395 OR4G1P-203ENST00000641984 1631 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
PRAMEP78395 AC010329.5-201ENST00000623497 2174 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.74□□□□□ -1.97
PRAMEP78395 MTND4P27-201ENST00000450813 1354 ntBASIC2.74□□□□□ -1.97
PRAMEP78395 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.73□□□□□ -1.97
PRAMEP78395 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
PRAMEP78395 Y_RNA.450-201ENST00000384198 113 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 AL139095.1-201ENST00000404326 391 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 SNORD56-201ENST00000413522 71 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.73□□□□□ -1.97
PRAMEP78395 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.73□□□□□ -1.97
PRAMEP78395 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.73□□□□□ -1.97
PRAMEP78395 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.73□□□□□ -1.97
PRAMEP78395 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.73□□□□□ -1.97
PRAMEP78395 AC092989.1-201ENST00000481235 277 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 RPL23AP49-201ENST00000492925 468 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 RPL22P13-201ENST00000493291 347 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 RNU6-189P-201ENST00000516120 101 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 RNU6-826P-201ENST00000516827 104 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 SNORD60.2-201ENST00000516883 86 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 SCARNA3-201ENST00000517097 143 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 SNORA31.23-201ENST00000517219 133 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PRAMEP78395 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.73□□□□□ -1.97
PRAMEP78395 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.73□□□□□ -1.97
PRAMEP78395 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.73□□□□□ -1.97
PRAMEP78395 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.73□□□□□ -1.97
PRAMEP78395 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.73□□□□□ -1.97
PRAMEP78395 RPS15AP11-201ENST00000594193 385 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 AL356280.1-201ENST00000603614 379 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 RNU6-85P-201ENST00000605989 107 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 AC092807.2-201ENST00000609367 243 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 U4.5-201ENST00000617137 123 ntBASIC2.73□□□□□ -1.97
PRAMEP78395 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PRAMEP78395 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
PRAMEP78395 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PRAMEP78395 RNY4P14-201ENST00000363656 96 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 MIR128-1-201ENST00000384921 82 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 OR9R1P-201ENST00000412200 877 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.72□□□□□ -1.97
PRAMEP78395 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.72□□□□□ -1.97
PRAMEP78395 BX276092.3-201ENST00000424182 230 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.72□□□□□ -1.97
PRAMEP78395 AL135938.1-201ENST00000443141 297 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AL031274.1-201ENST00000450334 232 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AC117503.1-201ENST00000472241 394 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 RPL7P43-201ENST00000478876 753 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AC103975.1-201ENST00000482506 483 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AIG1P1-201ENST00000503376 148 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.72□□□□□ -1.97
PRAMEP78395 MTCYBP40-201ENST00000509390 1135 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 RNU6-377P-201ENST00000515965 102 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AC069113.1-201ENST00000517763 267 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.72□□□□□ -1.97
PRAMEP78395 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.72□□□□□ -1.97
PRAMEP78395 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.72□□□□□ -1.97
PRAMEP78395 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.72□□□□□ -1.97
PRAMEP78395 AL121917.1-203ENST00000605534 577 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AL121757.2-201ENST00000611223 313 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.72□□□□□ -1.97
PRAMEP78395 U4.7-201ENST00000638126 106 ntBASIC2.72□□□□□ -1.97
PRAMEP78395 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.72□□□□□ -1.97
PRAMEP78395 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRAMEP78395 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.71□□□□□ -1.97
PRAMEP78395 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PRAMEP78395 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
PRAMEP78395 RNU6-428P-201ENST00000362942 107 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 RNU6-486P-201ENST00000363116 107 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 RNY3P3-201ENST00000363816 102 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 Y_RNA.231-201ENST00000364358 102 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 RNU6-220P-201ENST00000390919 107 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
PRAMEP78395 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.71□□□□□ -1.98
PRAMEP78395 RPLP0P7-201ENST00000416050 667 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 AL591043.1-201ENST00000432461 424 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 MRPL50P4-201ENST00000446432 475 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.71□□□□□ -1.98
PRAMEP78395 AP001025.1-201ENST00000486139 332 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.71□□□□□ -1.98
PRAMEP78395 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.71□□□□□ -1.98
PRAMEP78395 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.71□□□□□ -1.98
PRAMEP78395 SNORA14.1-201ENST00000516113 141 ntBASIC2.71□□□□□ -1.98
PRAMEP78395 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.71□□□□□ -1.98
PRAMEP78395 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms