Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-1069P-201ENST00000516612 133 ntBASIC2.45□□□□□ -2.02
LMO4P61968 SNORA64.4-201ENST00000516632 81 ntBASIC2.45□□□□□ -2.02
LMO4P61968 RNU6-928P-201ENST00000516876 104 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.45□□□□□ -2.02
LMO4P61968 ATP5F1P5-201ENST00000526403 760 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.45□□□□□ -2.02
LMO4P61968 AC107016.2-201ENST00000547968 190 ntBASIC2.45□□□□□ -2.02
LMO4P61968 GTF3AP2-201ENST00000557014 266 ntBASIC2.45□□□□□ -2.02
LMO4P61968 MTCO3P23-201ENST00000561363 289 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AMZ2P1-203ENST00000565833 850 ntBASIC2.45□□□□□ -2.02
LMO4P61968 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.45□□□□□ -2.02
LMO4P61968 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LMO4P61968 AL121655.1-201ENST00000605811 308 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AC099778.2-201ENST00000610904 211 ntBASIC2.45□□□□□ -2.02
LMO4P61968 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AL669831.3-213ENST00000636676 183 ntBASIC2.45□□□□□ -2.02
LMO4P61968 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
LMO4P61968 AC022336.2-201ENST00000568966 2538 ntBASIC2.45□□□□□ -2.02
LMO4P61968 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
LMO4P61968 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.45□□□□□ -2.02
LMO4P61968 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.45□□□□□ -2.02
LMO4P61968 AC096644.4-201ENST00000563417 2912 ntBASIC2.45□□□□□ -2.02
LMO4P61968 AL035425.3-201ENST00000564206 4996 ntBASIC2.44□□□□□ -2.02
LMO4P61968 KPNA2P1-201ENST00000458289 1591 ntBASIC2.44□□□□□ -2.02
LMO4P61968 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
LMO4P61968 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
LMO4P61968 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 RNU6-562P-201ENST00000362731 107 ntBASIC2.44□□□□□ -2.02
LMO4P61968 Y_RNA.112-201ENST00000363250 102 ntBASIC2.44□□□□□ -2.02
LMO4P61968 Y_RNA.148-201ENST00000363557 117 ntBASIC2.44□□□□□ -2.02
LMO4P61968 RNU6-799P-201ENST00000363567 107 ntBASIC2.44□□□□□ -2.02
LMO4P61968 RNA5SP139-201ENST00000364340 117 ntBASIC2.44□□□□□ -2.02
LMO4P61968 RNU2-33P-201ENST00000410344 192 ntBASIC2.44□□□□□ -2.02
LMO4P61968 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 AL590632.1-201ENST00000424289 371 ntBASIC2.44□□□□□ -2.02
LMO4P61968 RPL7P37-201ENST00000425095 738 ntBASIC2.44□□□□□ -2.02
LMO4P61968 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.44□□□□□ -2.02
LMO4P61968 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 AC006539.3-201ENST00000454258 129 ntBASIC2.44□□□□□ -2.02
LMO4P61968 snoU13.28-201ENST00000459235 104 ntBASIC2.44□□□□□ -2.02
LMO4P61968 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.44□□□□□ -2.02
LMO4P61968 AL135752.1-201ENST00000479477 471 ntBASIC2.44□□□□□ -2.02
LMO4P61968 AC006483.1-201ENST00000487308 313 ntBASIC2.44□□□□□ -2.02
LMO4P61968 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.44□□□□□ -2.02
LMO4P61968 AC079140.5-201ENST00000507882 310 ntBASIC2.44□□□□□ -2.02
LMO4P61968 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.44□□□□□ -2.02
LMO4P61968 MIR4513-201ENST00000581077 86 ntBASIC2.44□□□□□ -2.02
LMO4P61968 MIR5690-201ENST00000583739 73 ntBASIC2.44□□□□□ -2.02
LMO4P61968 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.44□□□□□ -2.02
LMO4P61968 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.44□□□□□ -2.02
LMO4P61968 NUTF2P8-201ENST00000604593 363 ntBASIC2.44□□□□□ -2.02
LMO4P61968 AC007938.3-201ENST00000604965 623 ntBASIC2.44□□□□□ -2.02
LMO4P61968 AP000654.2-201ENST00000605633 586 ntBASIC2.44□□□□□ -2.02
LMO4P61968 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 MTND5P16-201ENST00000460269 1703 ntBASIC2.44□□□□□ -2.02
LMO4P61968 MAPK10-362ENST00000641864 4484 ntBASIC2.44□□□□□ -2.02
LMO4P61968 MTND4P1-201ENST00000457501 1466 ntBASIC2.44□□□□□ -2.02
LMO4P61968 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMO4P61968 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LMO4P61968 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.43□□□□□ -2.02
LMO4P61968 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-1115P-201ENST00000362490 106 ntBASIC2.43□□□□□ -2.02
LMO4P61968 Y_RNA.133-201ENST00000363428 110 ntBASIC2.43□□□□□ -2.02
LMO4P61968 SNORD56.3-201ENST00000363507 71 ntBASIC2.43□□□□□ -2.02
LMO4P61968 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-1040P-201ENST00000383974 107 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-434P-201ENST00000384376 107 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-1105P-201ENST00000384774 107 ntBASIC2.43□□□□□ -2.02
LMO4P61968 EI24P2-201ENST00000397776 1076 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AL356057.3-201ENST00000402607 340 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RPS4XP7-201ENST00000406274 780 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNA5SP274-201ENST00000410484 108 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.43□□□□□ -2.02
LMO4P61968 ATG3P1-201ENST00000419507 911 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AL591704.1-201ENST00000432574 275 ntBASIC2.43□□□□□ -2.02
LMO4P61968 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.43□□□□□ -2.02
LMO4P61968 SNAP23P1-201ENST00000433229 246 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.43□□□□□ -2.02
LMO4P61968 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.43□□□□□ -2.02
LMO4P61968 RPL37P4-201ENST00000448908 268 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.43□□□□□ -2.02
LMO4P61968 MTND5P22-201ENST00000458380 195 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RPL23AP14-201ENST00000468281 468 ntBASIC2.43□□□□□ -2.02
LMO4P61968 KC877373.1-201ENST00000479066 408 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RPL23AP94-201ENST00000512518 302 ntBASIC2.43□□□□□ -2.02
LMO4P61968 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.43□□□□□ -2.02
LMO4P61968 RNA5SP356-201ENST00000515972 94 ntBASIC2.43□□□□□ -2.02
LMO4P61968 RNU6-1332P-201ENST00000516666 104 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms