Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL117342.1-201ENST00000404861 406 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS1BP61024 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.5□□□□□ -2.33
CKS1BP61024 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.5□□□□□ -2.33
CKS1BP61024 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.5□□□□□ -2.33
CKS1BP61024 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS1BP61024 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS1BP61024 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
CKS1BP61024 RNA5SP503-201ENST00000517047 117 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS1BP61024 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS1BP61024 AP000889.1-201ENST00000530968 660 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.5□□□□□ -2.33
CKS1BP61024 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CKS1BP61024 MIR4698-201ENST00000577795 80 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 BNIP3P16-201ENST00000589779 534 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 DPPA3P3-201ENST00000603842 430 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 MIR1248-201ENST00000629190 106 ntBASIC0.5□□□□□ -2.33
CKS1BP61024 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
CKS1BP61024 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CKS1BP61024 RNA5SP99-201ENST00000364020 114 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 SNORD114-6-201ENST00000364393 72 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 RNU6-1207P-201ENST00000384343 107 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.49□□□□□ -2.33
CKS1BP61024 CBX3P6-201ENST00000430257 527 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.49□□□□□ -2.33
CKS1BP61024 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.49□□□□□ -2.33
CKS1BP61024 MTND5P8-201ENST00000449817 1083 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 MED28P2-201ENST00000475771 317 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 RAP1BP2-201ENST00000478270 544 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS1BP61024 AC104629.1-201ENST00000494226 508 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.49□□□□□ -2.33
CKS1BP61024 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS1BP61024 RNA5SP481-201ENST00000516814 122 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 HMGB1P33-201ENST00000563485 527 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC138915.2-201ENST00000569776 97 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC137800.2-201ENST00000574375 120 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.49□□□□□ -2.33
CKS1BP61024 MIR3664-201ENST00000579074 99 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 RN7SL622P-201ENST00000585292 275 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC098848.2-201ENST00000588023 330 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 VN1R107P-201ENST00000601784 209 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AL590095.2-201ENST00000604136 117 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AL365434.2-201ENST00000607979 234 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CKS1BP61024 AC108706.1-201ENST00000611053 297 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AL365204.3-201ENST00000612448 685 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC040896.1-201ENST00000613819 479 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.49□□□□□ -2.33
CKS1BP61024 MIR3529-201ENST00000637713 78 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 AC099063.3-201ENST00000642066 185 ntBASIC0.49□□□□□ -2.33
CKS1BP61024 MIR548B-201ENST00000385247 97 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 RNU6-482P-201ENST00000391068 107 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 RNU6-932P-201ENST00000391108 106 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CKS1BP61024 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CKS1BP61024 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS1BP61024 AC010099.3-201ENST00000423896 409 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 GTF2IP13-201ENST00000438487 386 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS1BP61024 RNFT1P2-201ENST00000443064 757 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 RPS27AP8-201ENST00000452665 445 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS1BP61024 RNU6-333P-201ENST00000459117 107 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 AC010631.1-201ENST00000474150 156 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.48□□□□□ -2.33
CKS1BP61024 RNU6-113P-201ENST00000516653 101 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 RNU6-572P-201ENST00000516724 80 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CKS1BP61024 AL356057.1-201ENST00000533798 831 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.48□□□□□ -2.33
CKS1BP61024 AC126365.2-201ENST00000580630 379 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 AP002906.1-201ENST00000603405 233 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 AP000942.3-201ENST00000603702 160 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 BNIP3P31-201ENST00000604515 566 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.48□□□□□ -2.33
CKS1BP61024 AC099654.9-201ENST00000637055 678 ntBASIC0.48□□□□□ -2.33
CKS1BP61024 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CKS1BP61024 AL161781.1-201ENST00000354277 403 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 SNORA18.2-201ENST00000383865 132 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 MIR520E-201ENST00000384867 87 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 AC114482.1-201ENST00000418010 247 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.47□□□□□ -2.33
CKS1BP61024 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.47□□□□□ -2.33
CKS1BP61024 SNORA31.3-201ENST00000516029 96 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 SNORA70.22-201ENST00000517160 124 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 AC105129.3-201ENST00000605455 485 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 AC130324.3-201ENST00000614165 542 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 AC120349.3-201ENST00000624377 529 ntBASIC0.47□□□□□ -2.33
CKS1BP61024 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
CKS1BP61024 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CKS1BP61024 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CKS1BP61024 LINC02555-201ENST00000563933 1951 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 RNU6-343P-201ENST00000364709 104 ntBASIC0.46□□□□□ -2.34
CKS1BP61024 RNU6-843P-201ENST00000384454 104 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms