Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.4□□□□□ -1.87
EIF4A1P60842 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
EIF4A1P60842 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EIF4A1P60842 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EIF4A1P60842 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.39□□□□□ -1.87
EIF4A1P60842 RNU6-266P-201ENST00000364225 107 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 MIR450B-201ENST00000401182 78 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
EIF4A1P60842 RNA5SP38-201ENST00000410750 119 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 RNU6-607P-201ENST00000411283 108 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.39□□□□□ -1.87
EIF4A1P60842 AL353621.1-201ENST00000418219 243 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.39□□□□□ -1.87
EIF4A1P60842 MYL8P-204ENST00000431574 518 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC091179.1-201ENST00000461606 579 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC139453.3-201ENST00000493276 369 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.39□□□□□ -1.87
EIF4A1P60842 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.39□□□□□ -1.87
EIF4A1P60842 SNORA31.1-201ENST00000515993 133 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 SNORA31.5-201ENST00000516190 133 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC009902.1-201ENST00000519351 183 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 CYCSP27-201ENST00000527643 293 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.39□□□□□ -1.87
EIF4A1P60842 MIR3672-201ENST00000584290 82 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 AL031601.2-202ENST00000622650 282 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 IGHVIII-44-202ENST00000636235 289 ntBASIC3.39□□□□□ -1.87
EIF4A1P60842 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
EIF4A1P60842 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
EIF4A1P60842 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.39□□□□□ -1.87
EIF4A1P60842 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
EIF4A1P60842 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
EIF4A1P60842 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
EIF4A1P60842 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EIF4A1P60842 SNORD3E-201ENST00000362899 217 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
EIF4A1P60842 Y_RNA.474-201ENST00000384341 102 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 Y_RNA.480-201ENST00000384364 102 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 RNU6-140P-201ENST00000384566 108 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 Y_RNA.535-201ENST00000384612 99 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
EIF4A1P60842 RNU2-3P-201ENST00000410144 191 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 RNU2-68P-201ENST00000410878 191 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 VN1R36P-201ENST00000414936 291 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.38□□□□□ -1.87
EIF4A1P60842 SNRPEP9-201ENST00000436794 238 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.38□□□□□ -1.87
EIF4A1P60842 MTND4P17-201ENST00000470444 350 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.38□□□□□ -1.87
EIF4A1P60842 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.38□□□□□ -1.87
EIF4A1P60842 RNU1-86P-201ENST00000516108 154 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 Y_RNA.682-201ENST00000516457 100 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 RNU1-107P-201ENST00000516617 154 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 RNU6-1282P-201ENST00000516735 96 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 SNORA25.17-201ENST00000517184 124 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 GLYCAM1-201ENST00000546596 285 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 TRAV37-201ENST00000553906 342 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.38□□□□□ -1.87
EIF4A1P60842 AC027176.1-201ENST00000560204 514 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AL355375.2-201ENST00000574825 175 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 MIR4635-201ENST00000583759 79 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AL133393.1-201ENST00000603277 287 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AL670379.10-201ENST00000604330 253 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 AL670379.9-201ENST00000605428 253 ntBASIC3.38□□□□□ -1.87
EIF4A1P60842 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.38□□□□□ -1.87
EIF4A1P60842 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
EIF4A1P60842 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
EIF4A1P60842 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.38□□□□□ -1.87
EIF4A1P60842 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
EIF4A1P60842 Y_RNA.813-201ENST00000364639 102 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 CYCSP33-201ENST00000414485 327 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EIF4A1P60842 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.37□□□□□ -1.87
EIF4A1P60842 RN7SL429P-201ENST00000479090 223 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 RN7SL489P-201ENST00000486185 223 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 RN7SL327P-201ENST00000488659 223 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 MTCO1P29-201ENST00000496868 288 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.37□□□□□ -1.87
EIF4A1P60842 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.37□□□□□ -1.87
EIF4A1P60842 AC025755.1-201ENST00000521306 278 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 RNU6-323P-201ENST00000521915 107 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.37□□□□□ -1.87
EIF4A1P60842 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.37□□□□□ -1.87
EIF4A1P60842 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.37□□□□□ -1.87
EIF4A1P60842 AC023043.2-201ENST00000589678 1026 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.37□□□□□ -1.87
EIF4A1P60842 RN7SL853P-201ENST00000617250 223 ntBASIC3.37□□□□□ -1.87
EIF4A1P60842 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.37□□□□□ -1.87
EIF4A1P60842 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.37□□□□□ -1.87
EIF4A1P60842 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
EIF4A1P60842 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EIF4A1P60842 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.36□□□□□ -1.87
EIF4A1P60842 AC009487.2-201ENST00000420969 6821 ntBASIC3.36□□□□□ -1.87
EIF4A1P60842 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
EIF4A1P60842 RNU4-79P-201ENST00000362764 141 ntBASIC3.36□□□□□ -1.87
EIF4A1P60842 Y_RNA.212-201ENST00000364177 102 ntBASIC3.36□□□□□ -1.87
EIF4A1P60842 RNU6-217P-201ENST00000384164 104 ntBASIC3.36□□□□□ -1.87
EIF4A1P60842 RNU6-301P-201ENST00000384277 107 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms