Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 MIR412-201ENST00000362142 91 ntBASIC4.12□□□□□ -1.75
RTP1P59025 MIR423-201ENST00000362201 94 ntBASIC4.12□□□□□ -1.75
RTP1P59025 RNU6-629P-201ENST00000384061 103 ntBASIC4.12□□□□□ -1.75
RTP1P59025 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RTP1P59025 U3.26-201ENST00000391236 204 ntBASIC4.12□□□□□ -1.75
RTP1P59025 RNU2-33P-201ENST00000410344 192 ntBASIC4.12□□□□□ -1.75
RTP1P59025 RNU2-25P-201ENST00000411041 191 ntBASIC4.12□□□□□ -1.75
RTP1P59025 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.12□□□□□ -1.75
RTP1P59025 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.12□□□□□ -1.75
RTP1P59025 U8.21-201ENST00000459536 136 ntBASIC4.12□□□□□ -1.75
RTP1P59025 UBE2DNL-203ENST00000474922 222 ntBASIC4.12□□□□□ -1.75
RTP1P59025 RPL23AP45-201ENST00000476406 468 ntBASIC4.12□□□□□ -1.75
RTP1P59025 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.12□□□□□ -1.75
RTP1P59025 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.12□□□□□ -1.75
RTP1P59025 AC022080.3-201ENST00000544433 482 ntBASIC4.12□□□□□ -1.75
RTP1P59025 HMGB1P14-201ENST00000557424 591 ntBASIC4.12□□□□□ -1.75
RTP1P59025 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.12□□□□□ -1.75
RTP1P59025 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.12□□□□□ -1.75
RTP1P59025 FAM60BP-201ENST00000578364 658 ntBASIC4.12□□□□□ -1.75
RTP1P59025 SNORD84-203ENST00000584275 78 ntBASIC4.12□□□□□ -1.75
RTP1P59025 AC012493.2-201ENST00000595083 291 ntBASIC4.12□□□□□ -1.75
RTP1P59025 AC073410.2-201ENST00000603240 332 ntBASIC4.12□□□□□ -1.75
RTP1P59025 AL355877.2-201ENST00000603670 358 ntBASIC4.12□□□□□ -1.75
RTP1P59025 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RTP1P59025 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
RTP1P59025 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RTP1P59025 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.12□□□□□ -1.75
RTP1P59025 AL133383.2-201ENST00000622958 2336 ntBASIC4.11□□□□□ -1.75
RTP1P59025 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RTP1P59025 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RTP1P59025 RNU1-76P-201ENST00000362903 159 ntBASIC4.11□□□□□ -1.75
RTP1P59025 SNORD50.1-201ENST00000362987 71 ntBASIC4.11□□□□□ -1.75
RTP1P59025 Y_RNA.84-201ENST00000363011 104 ntBASIC4.11□□□□□ -1.75
RTP1P59025 SNORD27-201ENST00000363981 72 ntBASIC4.11□□□□□ -1.75
RTP1P59025 SNORD14B-201ENST00000364533 90 ntBASIC4.11□□□□□ -1.75
RTP1P59025 RNU6-338P-201ENST00000383888 105 ntBASIC4.11□□□□□ -1.75
RTP1P59025 Y_RNA.539-201ENST00000384635 107 ntBASIC4.11□□□□□ -1.75
RTP1P59025 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RTP1P59025 SNORA48.5-201ENST00000391143 135 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AL117339.3-201ENST00000418733 162 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.11□□□□□ -1.75
RTP1P59025 RPS12P23-201ENST00000419579 400 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.11□□□□□ -1.75
RTP1P59025 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.11□□□□□ -1.75
RTP1P59025 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.11□□□□□ -1.75
RTP1P59025 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RTP1P59025 RNU2-27P-201ENST00000516185 142 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.11□□□□□ -1.75
RTP1P59025 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.11□□□□□ -1.75
RTP1P59025 AC103996.1-201ENST00000555468 102 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AC010900.2-201ENST00000604508 210 ntBASIC4.11□□□□□ -1.75
RTP1P59025 YPEL5P2-201ENST00000605553 359 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AC004852.3-201ENST00000614131 326 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AC006065.5-201ENST00000623427 349 ntBASIC4.11□□□□□ -1.75
RTP1P59025 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.11□□□□□ -1.75
RTP1P59025 AC008725.1-201ENST00000605123 2263 ntBASIC4.11□□□□□ -1.75
RTP1P59025 AC116096.1-201ENST00000566804 2314 ntBASIC4.11□□□□□ -1.75
RTP1P59025 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RTP1P59025 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTP1P59025 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
RTP1P59025 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTP1P59025 U3.15-201ENST00000365398 212 ntBASIC4.1□□□□□ -1.75
RTP1P59025 Y_RNA.785-201ENST00000384290 109 ntBASIC4.1□□□□□ -1.75
RTP1P59025 MIR215-201ENST00000384858 110 ntBASIC4.1□□□□□ -1.75
RTP1P59025 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
RTP1P59025 RNU6-1203P-201ENST00000410703 110 ntBASIC4.1□□□□□ -1.75
RTP1P59025 RNU2-14P-201ENST00000411053 191 ntBASIC4.1□□□□□ -1.75
RTP1P59025 AC017083.1-201ENST00000428093 483 ntBASIC4.1□□□□□ -1.75
RTP1P59025 AC004383.1-201ENST00000438135 289 ntBASIC4.1□□□□□ -1.75
RTP1P59025 NDUFB1P2-201ENST00000449477 176 ntBASIC4.1□□□□□ -1.75
RTP1P59025 FABP5P15-201ENST00000453566 214 ntBASIC4.1□□□□□ -1.75
RTP1P59025 RPL30P10-201ENST00000488148 337 ntBASIC4.1□□□□□ -1.75
RTP1P59025 BTF3L4P4-201ENST00000506381 449 ntBASIC4.1□□□□□ -1.75
RTP1P59025 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.1□□□□□ -1.75
RTP1P59025 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.1□□□□□ -1.75
RTP1P59025 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.1□□□□□ -1.75
RTP1P59025 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.1□□□□□ -1.75
RTP1P59025 AC009779.6-201ENST00000603972 165 ntBASIC4.1□□□□□ -1.75
RTP1P59025 AC006077.1-201ENST00000604746 343 ntBASIC4.1□□□□□ -1.75
RTP1P59025 AC009318.2-201ENST00000610917 651 ntBASIC4.1□□□□□ -1.75
RTP1P59025 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RTP1P59025 AC137590.2-201ENST00000619709 240 ntBASIC4.1□□□□□ -1.75
RTP1P59025 AP000553.6-201ENST00000641242 118 ntBASIC4.1□□□□□ -1.75
RTP1P59025 Z75746.1-201ENST00000440243 2080 ntBASIC4.1□□□□□ -1.75
RTP1P59025 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.1□□□□□ -1.75
RTP1P59025 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms