Protein–RNA interactions for Protein: P51957

NEK4, Serine/threonine-protein kinase Nek4, humanhuman

Predictions only

Length 841 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P51957 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK4P51957 Y_RNA.812-201ENST00000610788 101 ntBASIC3.81□□□□□ -1.8
NEK4P51957 AC011890.2-201ENST00000613393 294 ntBASIC3.81□□□□□ -1.8
NEK4P51957 Y_RNA.784-201ENST00000613803 101 ntBASIC3.81□□□□□ -1.8
NEK4P51957 Y_RNA.787-201ENST00000616522 101 ntBASIC3.81□□□□□ -1.8
NEK4P51957 Y_RNA.780-201ENST00000617336 101 ntBASIC3.81□□□□□ -1.8
NEK4P51957 Y_RNA.801-201ENST00000619005 101 ntBASIC3.81□□□□□ -1.8
NEK4P51957 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.81□□□□□ -1.8
NEK4P51957 AC090617.7-201ENST00000623952 126 ntBASIC3.81□□□□□ -1.8
NEK4P51957 AC092608.2-201ENST00000624427 218 ntBASIC3.81□□□□□ -1.8
NEK4P51957 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.81□□□□□ -1.8
NEK4P51957 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEK4P51957 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEK4P51957 Y_RNA.2-201ENST00000362330 96 ntBASIC3.8□□□□□ -1.8
NEK4P51957 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
NEK4P51957 U8.8-201ENST00000365399 135 ntBASIC3.8□□□□□ -1.8
NEK4P51957 RNU6-1040P-201ENST00000383974 107 ntBASIC3.8□□□□□ -1.8
NEK4P51957 MIR559-201ENST00000385188 96 ntBASIC3.8□□□□□ -1.8
NEK4P51957 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK4P51957 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.8□□□□□ -1.8
NEK4P51957 Z82205.1-201ENST00000428456 297 ntBASIC3.8□□□□□ -1.8
NEK4P51957 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.8□□□□□ -1.8
NEK4P51957 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK4P51957 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK4P51957 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.8□□□□□ -1.8
NEK4P51957 AC116655.1-201ENST00000508324 901 ntBASIC3.8□□□□□ -1.8
NEK4P51957 ACA59.1-201ENST00000515966 143 ntBASIC3.8□□□□□ -1.8
NEK4P51957 SCARNA15.1-201ENST00000516384 125 ntBASIC3.8□□□□□ -1.8
NEK4P51957 AC109446.1-201ENST00000566172 220 ntBASIC3.8□□□□□ -1.8
NEK4P51957 AC020895.1-201ENST00000595362 272 ntBASIC3.8□□□□□ -1.8
NEK4P51957 AC022432.1-201ENST00000595739 310 ntBASIC3.8□□□□□ -1.8
NEK4P51957 VN1R107P-201ENST00000601784 209 ntBASIC3.8□□□□□ -1.8
NEK4P51957 Z83843.1-201ENST00000604070 3685 ntBASIC3.8□□□□□ -1.8
NEK4P51957 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEK4P51957 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.79□□□□□ -1.8
NEK4P51957 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.79□□□□□ -1.8
NEK4P51957 Y_RNA.132-201ENST00000363421 102 ntBASIC3.79□□□□□ -1.8
NEK4P51957 RNU6-105P-201ENST00000363909 104 ntBASIC3.79□□□□□ -1.8
NEK4P51957 RNU6-1280P-201ENST00000365211 107 ntBASIC3.79□□□□□ -1.8
NEK4P51957 RNU6-331P-201ENST00000384724 107 ntBASIC3.79□□□□□ -1.8
NEK4P51957 RNA5SP252-201ENST00000391131 119 ntBASIC3.79□□□□□ -1.8
NEK4P51957 AL590004.1-201ENST00000405321 300 ntBASIC3.79□□□□□ -1.8
NEK4P51957 AC023141.4-201ENST00000412031 328 ntBASIC3.79□□□□□ -1.8
NEK4P51957 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK4P51957 AC034236.1-201ENST00000469891 373 ntBASIC3.79□□□□□ -1.8
NEK4P51957 AC006199.1-201ENST00000548728 219 ntBASIC3.79□□□□□ -1.8
NEK4P51957 CR383656.8-201ENST00000549046 145 ntBASIC3.79□□□□□ -1.8
NEK4P51957 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK4P51957 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.79□□□□□ -1.8
NEK4P51957 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
NEK4P51957 MIR3171-201ENST00000584270 74 ntBASIC3.79□□□□□ -1.8
NEK4P51957 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.79□□□□□ -1.8
NEK4P51957 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.79□□□□□ -1.8
NEK4P51957 uc_338.22-201ENST00000622722 187 ntBASIC3.79□□□□□ -1.8
NEK4P51957 AC066616.2-201ENST00000559334 1481 ntBASIC3.79□□□□□ -1.8
NEK4P51957 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.78□□□□□ -1.8
NEK4P51957 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.78□□□□□ -1.8
NEK4P51957 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.78□□□□□ -1.8
NEK4P51957 MTND4P27-201ENST00000450813 1354 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AL021368.2-201ENST00000606125 5352 ntBASIC3.78□□□□□ -1.8
NEK4P51957 ADAM3A-203ENST00000461344 2157 ntBASIC3.78□□□□□ -1.8
NEK4P51957 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.78□□□□□ -1.8
NEK4P51957 RPL21P3-201ENST00000395517 478 ntBASIC3.78□□□□□ -1.8
NEK4P51957 FTH1P15-201ENST00000406984 280 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.78□□□□□ -1.8
NEK4P51957 AL137792.2-201ENST00000443484 235 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.78□□□□□ -1.8
NEK4P51957 AC146507.2-201ENST00000460608 476 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AC133134.1-201ENST00000466800 359 ntBASIC3.78□□□□□ -1.8
NEK4P51957 RNU6-581P-201ENST00000516214 105 ntBASIC3.78□□□□□ -1.8
NEK4P51957 SCARNA16.2-201ENST00000516520 172 ntBASIC3.78□□□□□ -1.8
NEK4P51957 RNU6-612P-201ENST00000516909 102 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AP005902.1-201ENST00000521358 186 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AC010186.2-204ENST00000537668 439 ntBASIC3.78□□□□□ -1.8
NEK4P51957 ELOCP31-201ENST00000540463 467 ntBASIC3.78□□□□□ -1.8
NEK4P51957 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.78□□□□□ -1.8
NEK4P51957 AC005899.2-201ENST00000584353 90 ntBASIC3.78□□□□□ -1.8
NEK4P51957 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.78□□□□□ -1.8
NEK4P51957 U3.45-201ENST00000607547 219 ntBASIC3.78□□□□□ -1.8
NEK4P51957 uc_338.25-201ENST00000613756 156 ntBASIC3.78□□□□□ -1.8
NEK4P51957 MIR3199-2-201ENST00000636243 86 ntBASIC3.78□□□□□ -1.8
NEK4P51957 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NEK4P51957 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NEK4P51957 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.78□□□□□ -1.8
NEK4P51957 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
NEK4P51957 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.77□□□□□ -1.81
NEK4P51957 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.77□□□□□ -1.81
NEK4P51957 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEK4P51957 GABRG2-229ENST00000641017 3628 ntBASIC3.77□□□□□ -1.81
NEK4P51957 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NEK4P51957 RNU6-1115P-201ENST00000362490 106 ntBASIC3.77□□□□□ -1.81
NEK4P51957 Y_RNA.112-201ENST00000363250 102 ntBASIC3.77□□□□□ -1.81
NEK4P51957 SNORD6-201ENST00000365444 73 ntBASIC3.77□□□□□ -1.81
NEK4P51957 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEK4P51957 Y_RNA.445-201ENST00000384168 102 ntBASIC3.77□□□□□ -1.81
NEK4P51957 SNORA41-201ENST00000384675 132 ntBASIC3.77□□□□□ -1.81
NEK4P51957 AC017083.1-201ENST00000428093 483 ntBASIC3.77□□□□□ -1.81
NEK4P51957 AL118496.2-201ENST00000448300 230 ntBASIC3.77□□□□□ -1.81
NEK4P51957 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.77□□□□□ -1.81
NEK4P51957 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms