Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
NEK3P51956 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.25□□□□□ -1.89
NEK3P51956 Z98742.2-201ENST00000431564 187 ntBASIC3.25□□□□□ -1.89
NEK3P51956 RN7SL863P-201ENST00000462370 296 ntBASIC3.25□□□□□ -1.89
NEK3P51956 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.25□□□□□ -1.89
NEK3P51956 RNU6-56P-201ENST00000516986 93 ntBASIC3.25□□□□□ -1.89
NEK3P51956 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.25□□□□□ -1.89
NEK3P51956 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.25□□□□□ -1.89
NEK3P51956 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.25□□□□□ -1.89
NEK3P51956 AC009314.1-201ENST00000603871 304 ntBASIC3.25□□□□□ -1.89
NEK3P51956 AL356157.2-201ENST00000605122 111 ntBASIC3.25□□□□□ -1.89
NEK3P51956 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.25□□□□□ -1.89
NEK3P51956 AC007792.1-201ENST00000623023 402 ntBASIC3.25□□□□□ -1.89
NEK3P51956 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEK3P51956 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NEK3P51956 OR56A5-201ENST00000340110 738 ntBASIC3.24□□□□□ -1.89
NEK3P51956 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.24□□□□□ -1.89
NEK3P51956 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NEK3P51956 DYNLT3P1-201ENST00000378574 347 ntBASIC3.24□□□□□ -1.89
NEK3P51956 Y_RNA.414-201ENST00000384011 101 ntBASIC3.24□□□□□ -1.89
NEK3P51956 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
NEK3P51956 MIR450B-201ENST00000401182 78 ntBASIC3.24□□□□□ -1.89
NEK3P51956 RNU6-1328P-201ENST00000410938 106 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AC092427.1-202ENST00000430569 476 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AL139415.2-201ENST00000431968 163 ntBASIC3.24□□□□□ -1.89
NEK3P51956 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.24□□□□□ -1.89
NEK3P51956 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.24□□□□□ -1.89
NEK3P51956 AC007969.2-201ENST00000441891 191 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AL031274.1-201ENST00000450334 232 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AC098799.2-201ENST00000509466 868 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.24□□□□□ -1.89
NEK3P51956 SMURF2P1-201ENST00000514992 481 ntBASIC3.24□□□□□ -1.89
NEK3P51956 RNU6-1314P-201ENST00000517139 104 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.24□□□□□ -1.89
NEK3P51956 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AC018638.8-201ENST00000588755 281 ntBASIC3.24□□□□□ -1.89
NEK3P51956 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AL160281.1-201ENST00000605307 311 ntBASIC3.24□□□□□ -1.89
NEK3P51956 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 AC090617.10-201ENST00000624308 134 ntBASIC3.24□□□□□ -1.89
NEK3P51956 Z75746.1-201ENST00000440243 2080 ntBASIC3.24□□□□□ -1.89
NEK3P51956 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.24□□□□□ -1.89
NEK3P51956 MTND4P27-201ENST00000450813 1354 ntBASIC3.24□□□□□ -1.89
NEK3P51956 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.24□□□□□ -1.89
NEK3P51956 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NEK3P51956 AC080128.1-201ENST00000474389 1917 ntBASIC3.23□□□□□ -1.89
NEK3P51956 MAPK10-266ENST00000641066 6555 ntBASIC3.23□□□□□ -1.89
NEK3P51956 SNORD56.1-201ENST00000362913 68 ntBASIC3.23□□□□□ -1.89
NEK3P51956 SET-203ENST00000372688 801 ntTSL 2 BASIC3.23□□□□□ -1.89
NEK3P51956 FGF7P8-201ENST00000402994 292 ntBASIC3.23□□□□□ -1.89
NEK3P51956 RNU2-23P-201ENST00000410545 195 ntBASIC3.23□□□□□ -1.89
NEK3P51956 RNU2-25P-201ENST00000411041 191 ntBASIC3.23□□□□□ -1.89
NEK3P51956 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK3P51956 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.23□□□□□ -1.89
NEK3P51956 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK3P51956 EEF1B2P7-201ENST00000451177 676 ntBASIC3.23□□□□□ -1.89
NEK3P51956 RNU7-66P-201ENST00000459469 62 ntBASIC3.23□□□□□ -1.89
NEK3P51956 RNU6-1037P-201ENST00000459571 107 ntBASIC3.23□□□□□ -1.89
NEK3P51956 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.23□□□□□ -1.89
NEK3P51956 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK3P51956 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.23□□□□□ -1.89
NEK3P51956 AC027176.1-201ENST00000560204 514 ntBASIC3.23□□□□□ -1.89
NEK3P51956 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.23□□□□□ -1.89
NEK3P51956 MIR2682-201ENST00000580305 110 ntBASIC3.23□□□□□ -1.89
NEK3P51956 BNIP3P10-201ENST00000605360 577 ntBASIC3.23□□□□□ -1.89
NEK3P51956 AC005000.2-201ENST00000605468 310 ntBASIC3.23□□□□□ -1.89
NEK3P51956 AC005046.1-201ENST00000608515 625 ntBASIC3.23□□□□□ -1.89
NEK3P51956 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
NEK3P51956 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NEK3P51956 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.23□□□□□ -1.89
NEK3P51956 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
NEK3P51956 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NEK3P51956 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.22□□□□□ -1.89
NEK3P51956 Y_RNA.72-201ENST00000362894 103 ntBASIC3.22□□□□□ -1.89
NEK3P51956 RNU6-336P-201ENST00000364891 107 ntBASIC3.22□□□□□ -1.89
NEK3P51956 RNU6-1180P-201ENST00000364935 107 ntBASIC3.22□□□□□ -1.89
NEK3P51956 RNU6-1329P-201ENST00000365664 107 ntBASIC3.22□□□□□ -1.89
NEK3P51956 FO393413.1-201ENST00000402892 195 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AL162578.1-201ENST00000406202 378 ntBASIC3.22□□□□□ -1.89
NEK3P51956 Z92545.1-201ENST00000411782 234 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK3P51956 CYCSP48-201ENST00000417124 323 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AC138623.1-201ENST00000418060 216 ntBASIC3.22□□□□□ -1.89
NEK3P51956 RPS12P18-201ENST00000442381 270 ntBASIC3.22□□□□□ -1.89
NEK3P51956 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK3P51956 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.22□□□□□ -1.89
NEK3P51956 AK3P2-201ENST00000507976 429 ntBASIC3.22□□□□□ -1.89
NEK3P51956 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AP005597.4-201ENST00000526762 229 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AC025423.5-201ENST00000550230 219 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.22□□□□□ -1.89
NEK3P51956 MIR4325-201ENST00000583049 90 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AL356280.1-201ENST00000603614 379 ntBASIC3.22□□□□□ -1.89
NEK3P51956 RBM11P1-201ENST00000604951 799 ntBASIC3.22□□□□□ -1.89
NEK3P51956 AC069294.1-201ENST00000608397 350 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms