Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MTCO3P5-201ENST00000433620 714 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.7□□□□□ -2.3
SRP9P49458 JTBP1-201ENST00000441314 247 ntBASIC0.7□□□□□ -2.3
SRP9P49458 BRK1P2-201ENST00000442875 223 ntBASIC0.7□□□□□ -2.3
SRP9P49458 MTND2P4-201ENST00000445034 1004 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.7□□□□□ -2.3
SRP9P49458 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.7□□□□□ -2.3
SRP9P49458 RNU7-136P-201ENST00000458819 69 ntBASIC0.7□□□□□ -2.3
SRP9P49458 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SRP9P49458 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC034244.1-201ENST00000507687 207 ntBASIC0.7□□□□□ -2.3
SRP9P49458 ATP5EP1-201ENST00000510257 156 ntBASIC0.7□□□□□ -2.3
SRP9P49458 PSMC1P5-201ENST00000512850 177 ntBASIC0.7□□□□□ -2.3
SRP9P49458 RNU6-572P-201ENST00000516724 80 ntBASIC0.7□□□□□ -2.3
SRP9P49458 SNORA76.2-201ENST00000517095 137 ntBASIC0.7□□□□□ -2.3
SRP9P49458 RN7SKP258-201ENST00000517151 304 ntBASIC0.7□□□□□ -2.3
SRP9P49458 OR6C7P-201ENST00000547875 934 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.7□□□□□ -2.3
SRP9P49458 AL731537.2-201ENST00000561565 951 ntBASIC0.7□□□□□ -2.3
SRP9P49458 MIR4698-201ENST00000577795 80 ntBASIC0.7□□□□□ -2.3
SRP9P49458 MIR3169-201ENST00000578032 83 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AP005136.1-201ENST00000579765 429 ntBASIC0.7□□□□□ -2.3
SRP9P49458 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC112220.2-201ENST00000605513 533 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC100814.1-201ENST00000606963 623 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
SRP9P49458 uc_338.15-201ENST00000615470 191 ntBASIC0.7□□□□□ -2.3
SRP9P49458 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AL359740.1-201ENST00000624340 592 ntBASIC0.7□□□□□ -2.3
SRP9P49458 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
SRP9P49458 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.7□□□□□ -2.3
SRP9P49458 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
SRP9P49458 AC107982.1-201ENST00000507171 1300 ntBASIC0.69□□□□□ -2.3
SRP9P49458 RNU6-650P-201ENST00000365658 111 ntBASIC0.69□□□□□ -2.3
SRP9P49458 MIR499A-201ENST00000384903 122 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AC119751.3-201ENST00000399720 670 ntBASIC0.69□□□□□ -2.3
SRP9P49458 RN7SKP61-201ENST00000410642 295 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.69□□□□□ -2.3
SRP9P49458 AC130509.1-201ENST00000464158 433 ntBASIC0.69□□□□□ -2.3
SRP9P49458 RPL26P26-201ENST00000480251 434 ntBASIC0.69□□□□□ -2.3
SRP9P49458 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.69□□□□□ -2.3
SRP9P49458 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.69□□□□□ -2.3
SRP9P49458 MTCYBP40-201ENST00000509390 1135 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AC008837.2-201ENST00000513076 418 ntBASIC0.69□□□□□ -2.3
SRP9P49458 SNORD116-28-201ENST00000516123 91 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.69□□□□□ -2.3
SRP9P49458 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.69□□□□□ -2.3
SRP9P49458 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.69□□□□□ -2.3
SRP9P49458 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.69□□□□□ -2.3
SRP9P49458 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.69□□□□□ -2.3
SRP9P49458 AC093012.1-202ENST00000549403 582 ntBASIC0.69□□□□□ -2.3
SRP9P49458 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.69□□□□□ -2.3
SRP9P49458 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
SRP9P49458 AC130454.1-201ENST00000622948 401 ntBASIC0.69□□□□□ -2.3
SRP9P49458 MIR6767-201ENST00000637302 66 ntBASIC0.69□□□□□ -2.3
SRP9P49458 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.69□□□□□ -2.3
SRP9P49458 MIR515-2-201ENST00000384883 83 ntBASIC0.68□□□□□ -2.3
SRP9P49458 MIR515-1-201ENST00000384884 83 ntBASIC0.68□□□□□ -2.3
SRP9P49458 RNU2-64P-201ENST00000411315 191 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC009518.2-201ENST00000418056 731 ntBASIC0.68□□□□□ -2.3
SRP9P49458 DPRXP1-201ENST00000426312 460 ntBASIC0.68□□□□□ -2.3
SRP9P49458 TRIM60P13-201ENST00000432350 1283 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.68□□□□□ -2.3
SRP9P49458 RPL30P6-201ENST00000475925 342 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC009902.1-201ENST00000519351 183 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.68□□□□□ -2.3
SRP9P49458 AC023538.1-201ENST00000534576 736 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.68□□□□□ -2.3
SRP9P49458 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.68□□□□□ -2.3
SRP9P49458 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.68□□□□□ -2.3
SRP9P49458 MIR4452-201ENST00000583004 71 ntBASIC0.68□□□□□ -2.3
SRP9P49458 FAM106DP-201ENST00000586416 501 ntBASIC0.68□□□□□ -2.3
SRP9P49458 KATNBL1P5-201ENST00000605015 517 ntBASIC0.68□□□□□ -2.3
SRP9P49458 BX284668.6-201ENST00000606899 438 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AL133445.2-201ENST00000611191 527 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC005332.6-201ENST00000613178 446 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC018926.1-201ENST00000616335 435 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC009033.1-201ENST00000624279 431 ntBASIC0.68□□□□□ -2.3
SRP9P49458 AC120349.3-201ENST00000624377 529 ntBASIC0.68□□□□□ -2.3
SRP9P49458 MIR1248-201ENST00000629190 106 ntBASIC0.68□□□□□ -2.3
SRP9P49458 FARSBP1-201ENST00000435808 1778 ntBASIC0.68□□□□□ -2.3
SRP9P49458 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.67□□□□□ -2.3
SRP9P49458 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SRP9P49458 RNU6-529P-201ENST00000363383 104 ntBASIC0.67□□□□□ -2.3
SRP9P49458 SNORD114-6-201ENST00000364393 72 ntBASIC0.67□□□□□ -2.3
SRP9P49458 SNORD114-22-201ENST00000365423 72 ntBASIC0.67□□□□□ -2.3
SRP9P49458 RNU6-296P-201ENST00000384608 107 ntBASIC0.67□□□□□ -2.3
SRP9P49458 SNORD65.1-201ENST00000390889 71 ntBASIC0.67□□□□□ -2.3
SRP9P49458 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
SRP9P49458 RNU2-42P-201ENST00000410697 113 ntBASIC0.67□□□□□ -2.3
SRP9P49458 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.67□□□□□ -2.3
SRP9P49458 CYCSP33-201ENST00000414485 327 ntBASIC0.67□□□□□ -2.3
SRP9P49458 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.67□□□□□ -2.3
SRP9P49458 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.67□□□□□ -2.3
SRP9P49458 DEFB130D-201ENST00000426866 237 ntBASIC0.67□□□□□ -2.3
SRP9P49458 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
SRP9P49458 AL669831.1-202ENST00000428504 417 ntBASIC0.67□□□□□ -2.3
SRP9P49458 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms