Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RN7SKP220-201ENST00000410611 288 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 SNORD56-201ENST00000413522 71 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX2-1P43699 UBE2V1P4-201ENST00000425374 344 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AL365400.1-201ENST00000431854 640 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 SNAP23P1-201ENST00000433229 246 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 RPL21P2-201ENST00000440049 481 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 UBBP3-201ENST00000445497 241 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 SNORA84-201ENST00000459229 133 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 RPL7P43-201ENST00000478876 753 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 MRPL42P6-201ENST00000486397 371 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 MTCYBP40-201ENST00000509390 1135 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC114781.4-201ENST00000513707 639 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX2-1P43699 RNA5SP76-201ENST00000516277 87 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.46□□□□□ -2.02
NKX2-1P43699 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.46□□□□□ -2.02
NKX2-1P43699 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.46□□□□□ -2.02
NKX2-1P43699 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.46□□□□□ -2.02
NKX2-1P43699 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 MIR3158-1-201ENST00000583596 81 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.46□□□□□ -2.02
NKX2-1P43699 AC023043.3-201ENST00000593113 385 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC078899.3-201ENST00000599065 212 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC009314.1-201ENST00000603871 304 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AC093913.1-201ENST00000614178 329 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX2-1P43699 U4.7-201ENST00000638126 106 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 MTND4P12-201ENST00000498999 1377 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 AL109809.4-201ENST00000603520 2185 ntBASIC2.46□□□□□ -2.02
NKX2-1P43699 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.46□□□□□ -2.02
NKX2-1P43699 AL359854.1-201ENST00000614203 1594 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 Y_RNA.142-201ENST00000363491 102 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RNU1-33P-201ENST00000364249 162 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RNU6-843P-201ENST00000384454 104 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 MIR627-201ENST00000384979 97 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RPS29P13-201ENST00000402041 169 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 FTH1P15-201ENST00000406984 280 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.45□□□□□ -2.02
NKX2-1P43699 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.45□□□□□ -2.02
NKX2-1P43699 AC097713.2-201ENST00000430199 356 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RPS15AP7-201ENST00000439294 405 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RPL21P10-201ENST00000463521 490 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 MED28P2-201ENST00000475771 317 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RPS27AP9-201ENST00000477681 438 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RPS29P2-201ENST00000479278 136 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC008628.2-201ENST00000502605 298 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC110794.1-201ENST00000505816 425 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 SCARNA17.1-201ENST00000516211 143 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 SCARNA17.2-201ENST00000516334 143 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 Y_RNA.687-201ENST00000516558 91 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 RNU7-30P-201ENST00000516835 62 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 SNORA31.18-201ENST00000517043 134 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NKX2-1P43699 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.45□□□□□ -2.02
NKX2-1P43699 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.45□□□□□ -2.02
NKX2-1P43699 AC243972.3-201ENST00000539655 198 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC007458.1-201ENST00000542812 373 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 MTCO3P13-201ENST00000577757 781 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 FGF7P1-201ENST00000582820 288 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AL117336.2-201ENST00000602435 335 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 ATP1B3P1-201ENST00000605365 821 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC009994.1-201ENST00000606889 253 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC096772.1-201ENST00000609146 564 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AL121757.2-201ENST00000611223 313 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 uc_338.5-201ENST00000611839 155 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 SCARNA17.4-201ENST00000614296 143 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 AC006133.1-201ENST00000617106 264 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 MIR7515-201ENST00000637837 67 ntBASIC2.45□□□□□ -2.02
NKX2-1P43699 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NKX2-1P43699 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NKX2-1P43699 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.45□□□□□ -2.02
NKX2-1P43699 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NKX2-1P43699 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.44□□□□□ -2.02
NKX2-1P43699 RNU6-1329P-201ENST00000365664 107 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NKX2-1P43699 RNU6-214P-201ENST00000384130 107 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 MIR490-201ENST00000384865 128 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 MT-TD-201ENST00000387419 68 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 PGBD4P6-201ENST00000421501 610 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NKX2-1P43699 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.44□□□□□ -2.02
NKX2-1P43699 AC004383.1-201ENST00000438135 289 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 MTND1P17-201ENST00000448961 204 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 GSTA11P-201ENST00000452866 669 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.44□□□□□ -2.02
NKX2-1P43699 RN7SL293P-201ENST00000481765 281 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.44□□□□□ -2.02
NKX2-1P43699 AC018437.1-201ENST00000492214 406 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 RPL22P13-201ENST00000493291 347 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 SNORA67.7-201ENST00000516664 135 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 RNU6-566P-201ENST00000516790 107 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 COX6CP5-201ENST00000527162 228 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 MIR3942-201ENST00000585264 109 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.44□□□□□ -2.02
NKX2-1P43699 AC012493.2-201ENST00000595083 291 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 AC008739.3-201ENST00000603262 127 ntBASIC2.44□□□□□ -2.02
NKX2-1P43699 AC244517.12-201ENST00000623581 663 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms