Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-648P-201ENST00000410190 107 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 RNU6-607P-201ENST00000411283 108 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCLP35914 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCLP35914 AL606489.2-201ENST00000433886 234 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 RPS15AP5-201ENST00000436276 388 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 EEF1B2P7-201ENST00000451177 676 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 FABP5P13-201ENST00000452144 328 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 RNU6-261P-201ENST00000459506 102 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC011005.2-201ENST00000487324 359 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 RPL23AP49-201ENST00000492925 468 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCLP35914 AC009646.1-201ENST00000510455 318 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGCLP35914 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCLP35914 LRRC34P2-201ENST00000514850 553 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.26□□□□□ -2.05
HMGCLP35914 BTF3P12-201ENST00000519620 469 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC016957.1-201ENST00000534895 309 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCLP35914 ZNF519P2-201ENST00000557032 169 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGCLP35914 HMGB1P33-201ENST00000563485 527 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.26□□□□□ -2.05
HMGCLP35914 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGCLP35914 MIR548AC-201ENST00000585049 88 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC073539.2-201ENST00000597113 165 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC012507.3-201ENST00000603556 477 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC080078.2-201ENST00000603766 501 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.26□□□□□ -2.05
HMGCLP35914 U4.5-201ENST00000617137 123 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC139792.3-201ENST00000623525 224 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC098679.4-201ENST00000624241 654 ntBASIC2.26□□□□□ -2.05
HMGCLP35914 AC005336.3-201ENST00000623833 2679 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 CKAP2P1-201ENST00000555477 2049 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGCLP35914 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGCLP35914 RNU6-996P-201ENST00000365438 107 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCLP35914 RNU6-908P-201ENST00000410160 94 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCLP35914 CYCSP33-201ENST00000414485 327 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HMGCLP35914 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCLP35914 AL627311.1-201ENST00000431514 115 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC000111.3-201ENST00000433478 193 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AL078601.1-201ENST00000444542 271 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 RNU6-572P-201ENST00000516724 80 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AK6P1-201ENST00000540219 478 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC006199.1-201ENST00000548728 219 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 SNRPGP18-201ENST00000553000 214 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AL157687.1-201ENST00000554853 619 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGCLP35914 AC005498.1-201ENST00000592125 465 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AL391813.1-201ENST00000603098 260 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AF250324.2-201ENST00000608299 610 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC093788.1-201ENST00000609356 927 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC013562.2-201ENST00000611632 603 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 MIR6840-201ENST00000611937 71 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 HMGB1P24-202ENST00000615653 685 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 U6.114-201ENST00000636407 96 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGCLP35914 AL354685.2-201ENST00000448218 1447 ntBASIC2.25□□□□□ -2.05
HMGCLP35914 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCLP35914 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HMGCLP35914 SNORD3E-201ENST00000362899 217 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 RNU6-1085P-201ENST00000363576 107 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 CIR1P3-201ENST00000405137 479 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 Y_RNA.623-201ENST00000411128 95 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 USP9YP6-201ENST00000413550 854 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGCLP35914 IPO7P1-201ENST00000442031 636 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 RNU7-63P-201ENST00000459054 62 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 SRRM1P2-201ENST00000464531 1192 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGCLP35914 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGCLP35914 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGCLP35914 RNU1-86P-201ENST00000516108 154 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 RNU1-107P-201ENST00000516617 154 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGCLP35914 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGCLP35914 AL137161.1-201ENST00000532231 390 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AP000889.2-201ENST00000532684 490 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.24□□□□□ -2.05
HMGCLP35914 AC078814.3-201ENST00000553036 491 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 HIF1AP1-201ENST00000553642 175 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGCLP35914 AC025165.5-201ENST00000602802 578 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AC087045.1-201ENST00000605856 382 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AC084782.3-201ENST00000612282 578 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AC090517.2-201ENST00000614966 680 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 AC010378.1-201ENST00000619270 362 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 MIR1321-201ENST00000637766 79 ntBASIC2.24□□□□□ -2.05
HMGCLP35914 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCLP35914 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGCLP35914 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
HMGCLP35914 RNU6-1287P-201ENST00000362914 107 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms