Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AL139095.1-201ENST00000404326 391 ntBASIC2.98□□□□□ -1.93
KRT9P35527 MIR1277-201ENST00000408536 78 ntBASIC2.98□□□□□ -1.93
KRT9P35527 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT9P35527 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.98□□□□□ -1.93
KRT9P35527 RPL30P4-201ENST00000429309 333 ntBASIC2.98□□□□□ -1.93
KRT9P35527 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT9P35527 FDX1P2-201ENST00000450769 375 ntBASIC2.98□□□□□ -1.93
KRT9P35527 MTND3P10-201ENST00000450967 341 ntBASIC2.98□□□□□ -1.93
KRT9P35527 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT9P35527 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT9P35527 RPL36AP48-201ENST00000485521 314 ntBASIC2.98□□□□□ -1.93
KRT9P35527 RNA5SP112-201ENST00000515937 99 ntBASIC2.98□□□□□ -1.93
KRT9P35527 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT9P35527 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
KRT9P35527 MIR3124-201ENST00000582636 67 ntBASIC2.98□□□□□ -1.93
KRT9P35527 AP000907.4-201ENST00000604143 237 ntBASIC2.98□□□□□ -1.93
KRT9P35527 RNU6-91P-201ENST00000607774 107 ntBASIC2.98□□□□□ -1.93
KRT9P35527 AC093732.2-201ENST00000607950 274 ntBASIC2.98□□□□□ -1.93
KRT9P35527 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
KRT9P35527 AC092794.2-201ENST00000620933 563 ntBASIC2.98□□□□□ -1.93
KRT9P35527 AC022418.1-201ENST00000624118 445 ntBASIC2.98□□□□□ -1.93
KRT9P35527 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT9P35527 AL354685.2-201ENST00000448218 1447 ntBASIC2.98□□□□□ -1.93
KRT9P35527 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT9P35527 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
KRT9P35527 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KRT9P35527 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KRT9P35527 AC138393.1-203ENST00000327086 343 ntBASIC2.97□□□□□ -1.93
KRT9P35527 Y_RNA.255-201ENST00000364581 97 ntBASIC2.97□□□□□ -1.93
KRT9P35527 MIR592-201ENST00000384959 97 ntBASIC2.97□□□□□ -1.93
KRT9P35527 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
KRT9P35527 AL590002.1-201ENST00000406554 418 ntBASIC2.97□□□□□ -1.93
KRT9P35527 RPL19P1-201ENST00000411635 428 ntBASIC2.97□□□□□ -1.93
KRT9P35527 NUP35P1-201ENST00000422734 947 ntBASIC2.97□□□□□ -1.93
KRT9P35527 BX276092.3-201ENST00000424182 230 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT9P35527 AL139132.1-201ENST00000431587 344 ntBASIC2.97□□□□□ -1.93
KRT9P35527 MTND3P23-201ENST00000431980 347 ntBASIC2.97□□□□□ -1.93
KRT9P35527 SNRPEP8-201ENST00000442866 260 ntBASIC2.97□□□□□ -1.93
KRT9P35527 PRPS1P1-201ENST00000445305 876 ntBASIC2.97□□□□□ -1.93
KRT9P35527 UBE2V1P7-201ENST00000446395 340 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT9P35527 MTND5P20-201ENST00000448677 143 ntBASIC2.97□□□□□ -1.93
KRT9P35527 RPL22P13-201ENST00000493291 347 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT9P35527 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.97□□□□□ -1.93
KRT9P35527 Y_RNA.702-201ENST00000516843 96 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT9P35527 AP001893.2-201ENST00000526949 202 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AC104383.1-201ENST00000530297 370 ntBASIC2.97□□□□□ -1.93
KRT9P35527 CR383656.8-201ENST00000549046 145 ntBASIC2.97□□□□□ -1.93
KRT9P35527 MIR5583-1-201ENST00000580941 59 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AL353621.2-201ENST00000605340 133 ntBASIC2.97□□□□□ -1.93
KRT9P35527 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AC104985.2-201ENST00000620598 500 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AL359880.1-201ENST00000621879 266 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AC006386.2-201ENST00000624491 75 ntBASIC2.97□□□□□ -1.93
KRT9P35527 AC012005.1-201ENST00000624575 75 ntBASIC2.97□□□□□ -1.93
KRT9P35527 MIR3688-2-201ENST00000636963 87 ntBASIC2.97□□□□□ -1.93
KRT9P35527 MIR3529-201ENST00000637713 78 ntBASIC2.97□□□□□ -1.93
KRT9P35527 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
KRT9P35527 RBBP8P1-201ENST00000449447 1844 ntBASIC2.96□□□□□ -1.94
KRT9P35527 Z75746.1-201ENST00000440243 2080 ntBASIC2.96□□□□□ -1.94
KRT9P35527 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
KRT9P35527 SNORA72.1-201ENST00000363485 129 ntBASIC2.96□□□□□ -1.94
KRT9P35527 Y_RNA.256-201ENST00000364594 104 ntBASIC2.96□□□□□ -1.94
KRT9P35527 Y_RNA.372-201ENST00000365599 102 ntBASIC2.96□□□□□ -1.94
KRT9P35527 Y_RNA.450-201ENST00000384198 113 ntBASIC2.96□□□□□ -1.94
KRT9P35527 SNORD116-20-201ENST00000384529 92 ntBASIC2.96□□□□□ -1.94
KRT9P35527 SNORA44-201ENST00000384584 132 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.96□□□□□ -1.94
KRT9P35527 RPL7P54-201ENST00000438336 674 ntBASIC2.96□□□□□ -1.94
KRT9P35527 MTCO3P18-201ENST00000440206 761 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC016691.1-201ENST00000441321 413 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC104389.3-201ENST00000445629 235 ntBASIC2.96□□□□□ -1.94
KRT9P35527 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.96□□□□□ -1.94
KRT9P35527 NFU1P2-201ENST00000448700 469 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC012308.1-201ENST00000451232 178 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC006026.2-201ENST00000457376 180 ntBASIC2.96□□□□□ -1.94
KRT9P35527 RNU7-180P-201ENST00000459240 63 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC112771.1-201ENST00000463581 102 ntBASIC2.96□□□□□ -1.94
KRT9P35527 RPL7P43-201ENST00000478876 753 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.96□□□□□ -1.94
KRT9P35527 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.96□□□□□ -1.94
KRT9P35527 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.96□□□□□ -1.94
KRT9P35527 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.96□□□□□ -1.94
KRT9P35527 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.96□□□□□ -1.94
KRT9P35527 SNORA25.11-201ENST00000515935 105 ntBASIC2.96□□□□□ -1.94
KRT9P35527 SNORA43.2-201ENST00000516652 128 ntBASIC2.96□□□□□ -1.94
KRT9P35527 RPPH1-2P-201ENST00000516688 293 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.96□□□□□ -1.94
KRT9P35527 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.96□□□□□ -1.94
KRT9P35527 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.96□□□□□ -1.94
KRT9P35527 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.96□□□□□ -1.94
KRT9P35527 AC104458.1-201ENST00000608243 463 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC244517.12-201ENST00000623581 663 ntBASIC2.96□□□□□ -1.94
KRT9P35527 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.96□□□□□ -1.94
KRT9P35527 AC099654.5-201ENST00000636479 350 ntBASIC2.96□□□□□ -1.94
KRT9P35527 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
KRT9P35527 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms