Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ZNF209P-201ENST00000593450 2304 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPA3P35244 RNU6-661P-201ENST00000362409 107 ntBASIC1.37□□□□□ -2.19
RPA3P35244 RNU1-58P-201ENST00000362413 163 ntBASIC1.37□□□□□ -2.19
RPA3P35244 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RPA3P35244 RNU6-622P-201ENST00000384272 103 ntBASIC1.37□□□□□ -2.19
RPA3P35244 MIR758-201ENST00000390227 88 ntBASIC1.37□□□□□ -2.19
RPA3P35244 RNU2-62P-201ENST00000410868 191 ntBASIC1.37□□□□□ -2.19
RPA3P35244 Y_RNA.623-201ENST00000411128 95 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.37□□□□□ -2.19
RPA3P35244 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.37□□□□□ -2.19
RPA3P35244 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.37□□□□□ -2.19
RPA3P35244 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.37□□□□□ -2.19
RPA3P35244 AC108667.1-201ENST00000428618 249 ntBASIC1.37□□□□□ -2.19
RPA3P35244 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.37□□□□□ -2.19
RPA3P35244 MTCO3P5-201ENST00000433620 714 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.37□□□□□ -2.19
RPA3P35244 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPA3P35244 AP001025.1-201ENST00000486139 332 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AC123904.2-201ENST00000548059 300 ntBASIC1.37□□□□□ -2.19
RPA3P35244 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
RPA3P35244 AL670379.2-201ENST00000604983 252 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AL670379.4-201ENST00000605279 254 ntBASIC1.37□□□□□ -2.19
RPA3P35244 uc_338.12-201ENST00000616344 181 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AC006338.1-201ENST00000618453 749 ntBASIC1.37□□□□□ -2.19
RPA3P35244 U1.36-201ENST00000620684 176 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AC024940.5-201ENST00000622889 474 ntBASIC1.37□□□□□ -2.19
RPA3P35244 FRG1KP-201ENST00000623592 341 ntBASIC1.37□□□□□ -2.19
RPA3P35244 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPA3P35244 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.37□□□□□ -2.19
RPA3P35244 HAUS6P2-201ENST00000433254 2404 ntBASIC1.37□□□□□ -2.19
RPA3P35244 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.36□□□□□ -2.19
RPA3P35244 MTND4P16-201ENST00000466108 1367 ntBASIC1.36□□□□□ -2.19
RPA3P35244 MIR424-201ENST00000362227 98 ntBASIC1.36□□□□□ -2.19
RPA3P35244 RNU4-68P-201ENST00000364314 141 ntBASIC1.36□□□□□ -2.19
RPA3P35244 RNU6-487P-201ENST00000365430 104 ntBASIC1.36□□□□□ -2.19
RPA3P35244 RNU6-72P-201ENST00000384285 79 ntBASIC1.36□□□□□ -2.19
RPA3P35244 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RPA3P35244 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
RPA3P35244 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
RPA3P35244 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
RPA3P35244 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.36□□□□□ -2.19
RPA3P35244 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.36□□□□□ -2.19
RPA3P35244 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
RPA3P35244 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.36□□□□□ -2.19
RPA3P35244 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.36□□□□□ -2.19
RPA3P35244 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
RPA3P35244 MTCYBP23-201ENST00000558717 1102 ntBASIC1.36□□□□□ -2.19
RPA3P35244 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.36□□□□□ -2.19
RPA3P35244 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.36□□□□□ -2.19
RPA3P35244 BNIP3P31-201ENST00000604515 566 ntBASIC1.36□□□□□ -2.19
RPA3P35244 AL022345.1-201ENST00000607292 135 ntBASIC1.36□□□□□ -2.19
RPA3P35244 RMST_6.1-201ENST00000611980 203 ntBASIC1.36□□□□□ -2.19
RPA3P35244 AC093648.1-201ENST00000623546 606 ntBASIC1.36□□□□□ -2.19
RPA3P35244 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
RPA3P35244 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPA3P35244 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
RPA3P35244 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.35□□□□□ -2.19
RPA3P35244 RNU6-212P-201ENST00000362642 104 ntBASIC1.35□□□□□ -2.19
RPA3P35244 RNU6-1210P-201ENST00000363775 107 ntBASIC1.35□□□□□ -2.19
RPA3P35244 RNY4P16-201ENST00000364768 94 ntBASIC1.35□□□□□ -2.19
RPA3P35244 RNU6-1242P-201ENST00000391052 103 ntBASIC1.35□□□□□ -2.19
RPA3P35244 RNU6-757P-201ENST00000410334 100 ntBASIC1.35□□□□□ -2.19
RPA3P35244 SRIP3-201ENST00000413200 219 ntBASIC1.35□□□□□ -2.19
RPA3P35244 MTCO3P46-201ENST00000425787 232 ntBASIC1.35□□□□□ -2.19
RPA3P35244 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.35□□□□□ -2.19
RPA3P35244 CALM1P1-201ENST00000442082 433 ntBASIC1.35□□□□□ -2.19
RPA3P35244 AL353752.1-201ENST00000454946 260 ntBASIC1.35□□□□□ -2.19
RPA3P35244 RN7SKP210-201ENST00000459176 261 ntBASIC1.35□□□□□ -2.19
RPA3P35244 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.35□□□□□ -2.19
RPA3P35244 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.35□□□□□ -2.19
RPA3P35244 CR383656.8-201ENST00000549046 145 ntBASIC1.35□□□□□ -2.19
RPA3P35244 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RPA3P35244 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
RPA3P35244 AC078795.2-201ENST00000602835 1252 ntBASIC1.35□□□□□ -2.19
RPA3P35244 AC174048.1-201ENST00000603389 144 ntBASIC1.35□□□□□ -2.19
RPA3P35244 CYP2C61P-201ENST00000604072 290 ntBASIC1.35□□□□□ -2.19
RPA3P35244 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.35□□□□□ -2.19
RPA3P35244 AC021755.4-201ENST00000616620 456 ntBASIC1.35□□□□□ -2.19
RPA3P35244 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.35□□□□□ -2.19
RPA3P35244 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.35□□□□□ -2.19
RPA3P35244 RNU6-338P-201ENST00000383888 105 ntBASIC1.34□□□□□ -2.19
RPA3P35244 SNORD116-20-201ENST00000384529 92 ntBASIC1.34□□□□□ -2.19
RPA3P35244 CBX3P9-201ENST00000402326 552 ntBASIC1.34□□□□□ -2.19
RPA3P35244 RNU2-23P-201ENST00000410545 195 ntBASIC1.34□□□□□ -2.19
RPA3P35244 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.34□□□□□ -2.19
RPA3P35244 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.34□□□□□ -2.19
RPA3P35244 AL008629.1-201ENST00000438615 184 ntBASIC1.34□□□□□ -2.19
RPA3P35244 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
RPA3P35244 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.34□□□□□ -2.19
RPA3P35244 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
RPA3P35244 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.34□□□□□ -2.19
RPA3P35244 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.34□□□□□ -2.19
RPA3P35244 MIR3198-2-201ENST00000577868 80 ntBASIC1.34□□□□□ -2.19
RPA3P35244 MIR4307-201ENST00000582802 84 ntBASIC1.34□□□□□ -2.19
RPA3P35244 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.34□□□□□ -2.19
RPA3P35244 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.34□□□□□ -2.19
RPA3P35244 AP000484.1-201ENST00000620067 1252 ntBASIC1.34□□□□□ -2.19
RPA3P35244 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.34□□□□□ -2.2
RPA3P35244 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms