Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 HMGB1P29-201ENST00000505659 499 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXC13P31276 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.87□□□□□ -1.95
HOXC13P31276 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 Y_RNA.672-201ENST00000516289 104 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXC13P31276 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.87□□□□□ -1.95
HOXC13P31276 PSMA3P-201ENST00000555485 635 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 HMGN1P30-201ENST00000589286 268 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.87□□□□□ -1.95
HOXC13P31276 AL391813.1-201ENST00000603098 260 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AL133255.1-201ENST00000606374 441 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AC093788.1-201ENST00000609356 927 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 AL132765.2-201ENST00000610812 351 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 YWHAEP7-203ENST00000622054 312 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC13P31276 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HOXC13P31276 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
HOXC13P31276 ADAM3A-203ENST00000461344 2157 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 MTND4P35-201ENST00000604257 1375 ntBASIC2.87□□□□□ -1.95
HOXC13P31276 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC13P31276 NACAP2-201ENST00000318548 624 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AC073343.1-201ENST00000328239 651 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNA5SP393-201ENST00000363423 117 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 SNORA67.1-201ENST00000364749 141 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNU1-138P-201ENST00000384093 164 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNU6-767P-201ENST00000384132 107 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNU6-1072P-201ENST00000384703 107 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNU6-443P-201ENST00000384780 107 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 MIR301A-201ENST00000385261 86 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 MTND3P17-201ENST00000416968 344 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.86□□□□□ -1.95
HOXC13P31276 AC093106.2-201ENST00000428212 385 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AL592045.1-201ENST00000429867 352 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AC002486.1-201ENST00000435098 391 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 PGBD4P3-201ENST00000440731 581 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 MTCYBP6-201ENST00000441810 138 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC13P31276 Y_RNA.638-201ENST00000459374 113 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.86□□□□□ -1.95
HOXC13P31276 GZMAP1-201ENST00000503054 631 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC13P31276 FGF7P4-201ENST00000509595 295 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNU6-1281P-201ENST00000516223 105 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 Y_RNA.693-201ENST00000516641 110 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RNU6-703P-201ENST00000516946 107 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HOXC13P31276 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.86□□□□□ -1.95
HOXC13P31276 AC011712.1-201ENST00000588959 234 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 uc_338.14-201ENST00000613162 166 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 AC139792.3-201ENST00000623525 224 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.86□□□□□ -1.95
HOXC13P31276 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HOXC13P31276 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
HOXC13P31276 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 RNU6-845P-201ENST00000362578 103 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 Y_RNA.67-201ENST00000362870 100 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 RNY1P12-201ENST00000364251 105 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 SNORD81.2-201ENST00000365153 76 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 RNU6-946P-201ENST00000383878 107 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 RNU6-658P-201ENST00000384606 106 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 SNORA75.4-201ENST00000391278 119 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AL590004.2-201ENST00000404787 371 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AL356432.1-201ENST00000405809 419 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 VN1R36P-201ENST00000414936 291 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AL096701.2-201ENST00000416920 238 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 PDCL2P1-201ENST00000419302 352 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AL591212.2-201ENST00000433923 257 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC13P31276 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC13P31276 MTND6P13-201ENST00000443510 523 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AC079448.1-201ENST00000449377 373 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AL139109.1-201ENST00000455491 297 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 RPS3P1-201ENST00000456781 192 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 TRBV1-201ENST00000476502 284 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 MRPL42P6-201ENST00000486397 371 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AC010493.1-201ENST00000513479 292 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.85□□□□□ -1.95
HOXC13P31276 SNORA9.3-201ENST00000516383 129 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 RNA5SP148-201ENST00000516527 94 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 SCARNA3-201ENST00000517097 143 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 HMGB1P41-201ENST00000520234 440 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AP003122.4-201ENST00000530980 758 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AL512310.1-201ENST00000548639 172 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AC021739.1-201ENST00000559631 174 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HOXC13P31276 ZNF861P-201ENST00000588126 639 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.85□□□□□ -1.95
HOXC13P31276 AC012507.3-201ENST00000603556 477 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC13P31276 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.85□□□□□ -1.95
HOXC13P31276 AC010205.1-201ENST00000616668 449 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 Z99571.1-201ENST00000636677 394 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 U6.99-201ENST00000637524 83 ntBASIC2.85□□□□□ -1.95
HOXC13P31276 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HOXC13P31276 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HOXC13P31276 RNU6-254P-201ENST00000363377 107 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms