Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 U8.22-201ENST00000459141 133 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 RPS26P21-201ENST00000475397 348 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC12P31275 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC12P31275 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.79□□□□□ -1.8
HOXC12P31275 AC009163.5-201ENST00000575421 637 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 MIR4474-201ENST00000579189 78 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 MIR5047-201ENST00000579212 100 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 HMGN2P15-201ENST00000585707 270 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC12P31275 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC12P31275 SCARNA4-201ENST00000629045 128 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC12P31275 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC12P31275 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.79□□□□□ -1.8
HOXC12P31275 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXC12P31275 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
HOXC12P31275 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 SNORD32A-201ENST00000364805 84 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 RNU6-142P-201ENST00000384019 107 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 Y_RNA.458-201ENST00000384240 102 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 RNU6-611P-201ENST00000384276 104 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 MIR32-201ENST00000384965 70 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 SNORD96B-201ENST00000386148 79 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 MIR1911-201ENST00000410783 80 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC12P31275 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC12P31275 AL356968.1-201ENST00000416622 474 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 AL117339.2-201ENST00000430475 180 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 AC010469.2-201ENST00000496412 480 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 RNU1-45P-201ENST00000517191 141 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 MIR2355-201ENST00000517199 87 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 SNORA31.23-201ENST00000517219 133 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 AC006199.1-201ENST00000548728 219 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 AC007375.1-201ENST00000554513 578 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC12P31275 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.78□□□□□ -1.8
HOXC12P31275 MIR4286-201ENST00000580651 93 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 AC010201.1-201ENST00000605051 540 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 RPL23AP88-201ENST00000605759 454 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC12P31275 AC005086.4-201ENST00000623065 213 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 U6.104-201ENST00000637979 90 ntBASIC3.78□□□□□ -1.8
HOXC12P31275 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC12P31275 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HOXC12P31275 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.78□□□□□ -1.8
HOXC12P31275 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
HOXC12P31275 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC12P31275 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC12P31275 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC12P31275 AC093908.1-201ENST00000623125 8092 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HOXC12P31275 MIR208A-201ENST00000362287 71 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 Y_RNA.183-201ENST00000363882 113 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC12P31275 Y_RNA.483-201ENST00000384380 101 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 Y_RNA.489-201ENST00000384410 101 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 Y_RNA.504-201ENST00000384481 104 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 RNU6-130P-201ENST00000411112 103 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC12P31275 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC12P31275 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC12P31275 LINC01399-202ENST00000458450 244 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 MED28P2-201ENST00000475771 317 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 RNU2-53P-201ENST00000516257 147 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 AC022868.1-201ENST00000517767 391 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.77□□□□□ -1.81
HOXC12P31275 AP003733.2-201ENST00000529409 171 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 TRAV8-5-201ENST00000537369 341 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.77□□□□□ -1.81
HOXC12P31275 AC090617.3-201ENST00000573670 475 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 AL356157.2-201ENST00000605122 111 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 MIR6891-201ENST00000618788 93 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 AC091903.1-201ENST00000624322 454 ntBASIC3.77□□□□□ -1.81
HOXC12P31275 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HOXC12P31275 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC12P31275 AC010615.1-201ENST00000594254 1764 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.76□□□□□ -1.81
HOXC12P31275 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HOXC12P31275 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.76□□□□□ -1.81
HOXC12P31275 SNORA29-201ENST00000384183 140 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-17P-201ENST00000384245 107 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-18P-201ENST00000384527 107 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNA5SP372-201ENST00000390836 115 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNA5SP36-201ENST00000410197 133 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNU6-847P-201ENST00000411115 108 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 RNA5SP39-201ENST00000411245 120 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 CYCSP19-201ENST00000411715 316 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 AL356095.1-201ENST00000417217 199 ntBASIC3.76□□□□□ -1.81
HOXC12P31275 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms