Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC109927.2-201ENST00000506416 303 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 ARL2BPP4-201ENST00000506854 471 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXA9P31269 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXA9P31269 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXA9P31269 SCARNA3-201ENST00000517097 143 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC084851.1-201ENST00000529105 249 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC118273.2-201ENST00000532092 465 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC087883.1-201ENST00000551882 391 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXA9P31269 MIR4498-201ENST00000577599 66 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 MIR4528-201ENST00000577763 90 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.96□□□□□ -2.1
HOXA9P31269 MIR3682-201ENST00000581338 84 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC040904.1-201ENST00000590850 223 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC174048.1-201ENST00000603389 144 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 MIR15A-201ENST00000607334 83 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 AC009509.4-201ENST00000619202 509 ntBASIC1.96□□□□□ -2.1
HOXA9P31269 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA9P31269 MTND4P1-201ENST00000457501 1466 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 ADAM3A-203ENST00000461344 2157 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AL390237.1-201ENST00000404226 1415 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 NACAP2-201ENST00000318548 624 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA9P31269 Y_RNA.201-201ENST00000364052 96 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 Y_RNA.338-201ENST00000365320 114 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 Z98749.2-208ENST00000381646 500 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 Y_RNA.553-201ENST00000384670 102 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 MIR218-1-201ENST00000384999 110 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 RNU2-39P-201ENST00000410604 198 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 NDUFS5P4-201ENST00000412983 318 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AL031779.1-201ENST00000415663 330 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 EIF1AXP1-201ENST00000419267 435 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXA9P31269 AL109913.1-201ENST00000421173 514 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 MED13P1-201ENST00000428342 171 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA9P31269 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 AL591704.1-201ENST00000432574 275 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 MTND2P22-201ENST00000444325 1033 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AL360221.1-201ENST00000445989 335 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 PMCHL2-203ENST00000457791 237 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.95□□□□□ -2.1
HOXA9P31269 AC093534.1-201ENST00000504977 132 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC010424.1-201ENST00000506336 297 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 MTCO3P28-201ENST00000513351 515 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 RNU1-40P-201ENST00000516816 164 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 RNU1-97P-201ENST00000516872 164 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 RNU6-677P-201ENST00000516914 101 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 AP002453.2-201ENST00000533503 320 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA9P31269 AL133241.1-201ENST00000556832 487 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.95□□□□□ -2.1
HOXA9P31269 RSL24D1P11-201ENST00000591045 491 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA9P31269 AL627230.6-201ENST00000611129 280 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 AC098657.3-201ENST00000620434 263 ntBASIC1.95□□□□□ -2.1
HOXA9P31269 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXA9P31269 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.95□□□□□ -2.1
HOXA9P31269 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXA9P31269 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.94□□□□□ -2.1
HOXA9P31269 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HOXA9P31269 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HOXA9P31269 RNA5SP125-201ENST00000364843 120 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 RNA5SP190-201ENST00000365222 118 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 RNU6-282P-201ENST00000365357 103 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HOXA9P31269 SNORA75B-201ENST00000384053 137 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 MIR1294-201ENST00000408503 142 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA9P31269 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA9P31269 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA9P31269 RPL26P27-201ENST00000414397 437 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 C1DP2-201ENST00000418167 426 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA9P31269 AL353729.1-201ENST00000425044 720 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AIMP1P2-201ENST00000425294 312 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC003989.2-201ENST00000440224 169 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AL136380.1-201ENST00000447970 162 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC079448.1-201ENST00000449377 373 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA9P31269 RNU6-956P-201ENST00000458868 103 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 RPL37P6-201ENST00000460682 294 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.94□□□□□ -2.1
HOXA9P31269 AC068781.1-201ENST00000488231 618 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 RBBP4P6-201ENST00000508098 202 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AC108078.2-201ENST00000510750 236 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 RNU6-250P-201ENST00000516958 103 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 RNU2-19P-201ENST00000517288 84 ntBASIC1.94□□□□□ -2.1
HOXA9P31269 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.94□□□□□ -2.1
HOXA9P31269 GNAI2P1-201ENST00000541815 315 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms