Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DMAP28067 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
HLA-DMAP28067 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 RBBP8P1-201ENST00000449447 1844 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 RNU4-82P-201ENST00000362443 140 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 RNU1-23P-201ENST00000363361 144 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 RNU6-371P-201ENST00000364283 108 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC068050.1-201ENST00000394891 380 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 RNA5SP508-201ENST00000411327 119 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AL135786.1-201ENST00000415892 214 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 HIGD1AP15-201ENST00000416198 280 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC006366.1-201ENST00000422002 759 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 MTND2P9-201ENST00000422293 931 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AL645568.3-201ENST00000433683 316 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC119618.1-201ENST00000434191 222 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 UBE2D3P4-201ENST00000441973 436 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC245102.2-201ENST00000448956 180 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 USP9YP12-201ENST00000450481 570 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC006512.1-201ENST00000468816 291 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 RPS29P11-201ENST00000496507 171 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 RPL38P4-201ENST00000502376 214 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC005178.1-201ENST00000508392 440 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC022616.3-201ENST00000523940 148 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC011979.2-201ENST00000527568 352 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC022878.1-201ENST00000530684 149 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 RPL21P5-201ENST00000554662 472 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC109446.2-201ENST00000567872 497 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC008521.1-201ENST00000587471 187 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AF131215.7-201ENST00000602443 707 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC022022.2-201ENST00000602989 360 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC112191.3-201ENST00000604371 277 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC018638.7-201ENST00000605836 1114 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AL121992.2-201ENST00000606262 256 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DMAP28067 AC004223.4-201ENST00000612426 332 ntBASIC1.46□□□□□ -2.18
HLA-DMAP28067 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AL356292.1-201ENST00000283110 373 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC073343.1-201ENST00000328239 651 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 MIR126-201ENST00000362291 85 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU5F-7P-201ENST00000363696 115 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU6-169P-201ENST00000365336 107 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU6-395P-201ENST00000365662 106 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 MIR558-201ENST00000384920 94 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC019129.1-201ENST00000403786 261 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 MIR1283-2-201ENST00000408621 87 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU6-195P-201ENST00000411352 109 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC009310.1-201ENST00000414414 451 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC009518.2-201ENST00000418056 731 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 ELOCP4-201ENST00000420090 333 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC000111.3-201ENST00000433478 193 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 MTATP6P16-201ENST00000434543 526 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 CALM1P1-201ENST00000442082 433 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AL353705.4-201ENST00000449661 238 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AP001025.1-201ENST00000486139 332 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 FAM206BP-201ENST00000510179 541 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC010486.1-201ENST00000511793 424 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU1-86P-201ENST00000516108 154 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU1-107P-201ENST00000516617 154 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC008015.1-201ENST00000555505 465 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC090616.2-202ENST00000584248 222 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC012409.4-201ENST00000612923 249 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 AC131159.1-201ENST00000621854 213 ntBASIC1.45□□□□□ -2.18
HLA-DMAP28067 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DMAP28067 RNU6-61P-201ENST00000365528 109 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 RNU6-72P-201ENST00000384285 79 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 RNU1-57P-201ENST00000384491 166 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 MIR10A-201ENST00000385043 110 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 MRPL42P2-201ENST00000403169 426 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 RNU2-39P-201ENST00000410604 198 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL360271.2-201ENST00000447710 161 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms