Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MTATP6P7-201ENST00000453315 681 ntBASIC3.61□□□□□ -1.83
XPAP23025 MTATP8P1-201ENST00000467115 207 ntBASIC3.61□□□□□ -1.83
XPAP23025 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.61□□□□□ -1.83
XPAP23025 AC110768.1-201ENST00000509222 400 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
XPAP23025 RNU6-612P-201ENST00000516909 102 ntBASIC3.61□□□□□ -1.83
XPAP23025 AP005902.1-201ENST00000521358 186 ntBASIC3.61□□□□□ -1.83
XPAP23025 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.61□□□□□ -1.83
XPAP23025 AC005476.1-201ENST00000554427 397 ntBASIC3.61□□□□□ -1.83
XPAP23025 LINC00933-203ENST00000559812 219 ntBASIC3.61□□□□□ -1.83
XPAP23025 SUB1P3-201ENST00000564581 315 ntBASIC3.61□□□□□ -1.83
XPAP23025 AMZ2P1-203ENST00000565833 850 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.61□□□□□ -1.83
XPAP23025 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.61□□□□□ -1.83
XPAP23025 KLKP1-201ENST00000595979 403 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC012468.1-201ENST00000604888 430 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC018889.1-201ENST00000605372 397 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC005046.1-201ENST00000608515 625 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC019176.2-201ENST00000611579 315 ntBASIC3.61□□□□□ -1.83
XPAP23025 HMGB1P24-202ENST00000615653 685 ntBASIC3.61□□□□□ -1.83
XPAP23025 AL162373.1-201ENST00000620433 407 ntBASIC3.61□□□□□ -1.83
XPAP23025 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.61□□□□□ -1.83
XPAP23025 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
XPAP23025 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.61□□□□□ -1.83
XPAP23025 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
XPAP23025 MAPK10-362ENST00000641864 4484 ntBASIC3.61□□□□□ -1.83
XPAP23025 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
XPAP23025 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
XPAP23025 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
XPAP23025 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
XPAP23025 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
XPAP23025 AC091812.1-201ENST00000432235 1948 ntBASIC3.6□□□□□ -1.83
XPAP23025 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
XPAP23025 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.6□□□□□ -1.83
XPAP23025 SNORA14A-201ENST00000364773 135 ntBASIC3.6□□□□□ -1.83
XPAP23025 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
XPAP23025 AC117470.1-201ENST00000381974 330 ntBASIC3.6□□□□□ -1.83
XPAP23025 RNU6-26P-201ENST00000383985 107 ntBASIC3.6□□□□□ -1.83
XPAP23025 RNU6-574P-201ENST00000384265 107 ntBASIC3.6□□□□□ -1.83
XPAP23025 RNU6-1035P-201ENST00000384477 107 ntBASIC3.6□□□□□ -1.83
XPAP23025 RNA5SP171-201ENST00000391071 115 ntBASIC3.6□□□□□ -1.83
XPAP23025 U3.37-201ENST00000408528 213 ntBASIC3.6□□□□□ -1.83
XPAP23025 HMGN2P30-201ENST00000423237 256 ntBASIC3.6□□□□□ -1.83
XPAP23025 HMGB3P8-201ENST00000449709 577 ntBASIC3.6□□□□□ -1.83
XPAP23025 CYCSP35-201ENST00000451978 304 ntBASIC3.6□□□□□ -1.83
XPAP23025 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.6□□□□□ -1.83
XPAP23025 RPS29P27-201ENST00000463711 170 ntBASIC3.6□□□□□ -1.83
XPAP23025 RPL17P19-201ENST00000489069 552 ntBASIC3.6□□□□□ -1.83
XPAP23025 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.6□□□□□ -1.83
XPAP23025 RNU4-77P-201ENST00000516692 156 ntBASIC3.6□□□□□ -1.83
XPAP23025 AC109479.2-201ENST00000517842 174 ntBASIC3.6□□□□□ -1.83
XPAP23025 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
XPAP23025 AC074050.1-201ENST00000563247 211 ntBASIC3.6□□□□□ -1.83
XPAP23025 AC020895.1-201ENST00000595362 272 ntBASIC3.6□□□□□ -1.83
XPAP23025 AC104695.3-201ENST00000604052 296 ntBASIC3.6□□□□□ -1.83
XPAP23025 HSPE1P7-201ENST00000604681 321 ntBASIC3.6□□□□□ -1.83
XPAP23025 SNORD58B-201ENST00000607313 66 ntBASIC3.6□□□□□ -1.83
XPAP23025 AC004852.3-201ENST00000614131 326 ntBASIC3.6□□□□□ -1.83
XPAP23025 AC084757.4-201ENST00000616350 526 ntBASIC3.6□□□□□ -1.83
XPAP23025 AC097372.5-201ENST00000623665 376 ntBASIC3.6□□□□□ -1.83
XPAP23025 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
XPAP23025 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.6□□□□□ -1.83
XPAP23025 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
XPAP23025 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
XPAP23025 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.59□□□□□ -1.83
XPAP23025 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
XPAP23025 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
XPAP23025 RNU6-942P-201ENST00000363002 107 ntBASIC3.59□□□□□ -1.83
XPAP23025 RNY1P16-201ENST00000363063 111 ntBASIC3.59□□□□□ -1.83
XPAP23025 RNA5SP50-201ENST00000363731 107 ntBASIC3.59□□□□□ -1.83
XPAP23025 RNY3P11-201ENST00000364153 102 ntBASIC3.59□□□□□ -1.83
XPAP23025 HMGN2P8-201ENST00000391458 268 ntBASIC3.59□□□□□ -1.83
XPAP23025 AL591034.2-201ENST00000402839 359 ntBASIC3.59□□□□□ -1.83
XPAP23025 RPL26P27-201ENST00000414397 437 ntBASIC3.59□□□□□ -1.83
XPAP23025 NUP35P1-201ENST00000422734 947 ntBASIC3.59□□□□□ -1.83
XPAP23025 AC096644.2-201ENST00000429278 159 ntBASIC3.59□□□□□ -1.83
XPAP23025 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.59□□□□□ -1.83
XPAP23025 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.59□□□□□ -1.83
XPAP23025 PRSS3P4-201ENST00000453323 162 ntBASIC3.59□□□□□ -1.83
XPAP23025 AL353752.1-201ENST00000454946 260 ntBASIC3.59□□□□□ -1.83
XPAP23025 U8.21-201ENST00000459536 136 ntBASIC3.59□□□□□ -1.83
XPAP23025 RPS27AP10-201ENST00000496103 208 ntBASIC3.59□□□□□ -1.83
XPAP23025 BTF3L4P4-201ENST00000506381 449 ntBASIC3.59□□□□□ -1.83
XPAP23025 MTND4LP22-201ENST00000508209 276 ntBASIC3.59□□□□□ -1.83
XPAP23025 RNU6-764P-201ENST00000516396 105 ntBASIC3.59□□□□□ -1.83
XPAP23025 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.59□□□□□ -1.83
XPAP23025 AC011602.1-201ENST00000546484 331 ntBASIC3.59□□□□□ -1.83
XPAP23025 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.59□□□□□ -1.83
XPAP23025 MIR4444-1-201ENST00000581696 74 ntBASIC3.59□□□□□ -1.83
XPAP23025 MIR4444-2-201ENST00000584390 74 ntBASIC3.59□□□□□ -1.83
XPAP23025 AL355598.1-201ENST00000604169 202 ntBASIC3.59□□□□□ -1.83
XPAP23025 AP000942.4-201ENST00000604811 241 ntBASIC3.59□□□□□ -1.83
XPAP23025 AC012314.7-201ENST00000619693 93 ntBASIC3.59□□□□□ -1.83
XPAP23025 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
XPAP23025 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.59□□□□□ -1.83
XPAP23025 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.59□□□□□ -1.83
XPAP23025 ZNF72P-201ENST00000425869 1908 ntBASIC3.59□□□□□ -1.83
XPAP23025 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
XPAP23025 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
XPAP23025 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 215.7 ms