Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ELOCP10-201ENST00000440624 327 ntBASIC-0.46□□□□□ -2.48
VCANP13611 AC104108.1-201ENST00000509930 412 ntBASIC-0.46□□□□□ -2.48
VCANP13611 AC105185.1-201ENST00000518705 535 ntBASIC-0.46□□□□□ -2.48
VCANP13611 AC105029.1-201ENST00000520250 669 ntBASIC-0.46□□□□□ -2.48
VCANP13611 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC-0.46□□□□□ -2.48
VCANP13611 ELOCP34-201ENST00000604436 327 ntBASIC-0.46□□□□□ -2.48
VCANP13611 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.46□□□□□ -2.48
VCANP13611 SNRPEP9-201ENST00000436794 238 ntBASIC-0.46□□□□□ -2.48
VCANP13611 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.46□□□□□ -2.48
VCANP13611 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC-0.46□□□□□ -2.48
VCANP13611 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC-0.46□□□□□ -2.48
VCANP13611 AC104136.1-201ENST00000512969 394 ntBASIC-0.46□□□□□ -2.48
VCANP13611 AC116347.2-201ENST00000514912 523 ntBASIC-0.46□□□□□ -2.48
VCANP13611 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.46□□□□□ -2.48
VCANP13611 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.46□□□□□ -2.48
VCANP13611 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.47□□□□□ -2.48
VCANP13611 RNY1P7-201ENST00000384743 110 ntBASIC-0.47□□□□□ -2.48
VCANP13611 AC016909.1-201ENST00000415916 166 ntBASIC-0.47□□□□□ -2.48
VCANP13611 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.47□□□□□ -2.48
VCANP13611 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.47□□□□□ -2.48
VCANP13611 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.47□□□□□ -2.48
VCANP13611 RNA5SP192-201ENST00000364404 120 ntBASIC-0.47□□□□□ -2.49
VCANP13611 RNU4-16P-201ENST00000364737 141 ntBASIC-0.47□□□□□ -2.49
VCANP13611 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.47□□□□□ -2.49
VCANP13611 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.47□□□□□ -2.49
VCANP13611 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.47□□□□□ -2.49
VCANP13611 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.47□□□□□ -2.49
VCANP13611 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.47□□□□□ -2.49
VCANP13611 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
VCANP13611 RPL7P30-201ENST00000420888 709 ntBASIC-0.48□□□□□ -2.49
VCANP13611 USP9YP26-201ENST00000421008 661 ntBASIC-0.48□□□□□ -2.49
VCANP13611 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.48□□□□□ -2.49
VCANP13611 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC-0.48□□□□□ -2.49
VCANP13611 MIR3115-201ENST00000577915 68 ntBASIC-0.48□□□□□ -2.49
VCANP13611 ZNF680P1-201ENST00000436625 1469 ntBASIC-0.48□□□□□ -2.49
VCANP13611 AC239798.3-201ENST00000454459 408 ntBASIC-0.48□□□□□ -2.49
VCANP13611 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.48□□□□□ -2.49
VCANP13611 AC068647.2-201ENST00000637380 353 ntBASIC-0.48□□□□□ -2.49
VCANP13611 MIR7515-201ENST00000637837 67 ntBASIC-0.48□□□□□ -2.49
VCANP13611 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
VCANP13611 RNU6-877P-201ENST00000383868 107 ntBASIC-0.48□□□□□ -2.49
VCANP13611 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.48□□□□□ -2.49
VCANP13611 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.48□□□□□ -2.49
VCANP13611 LRRC34P1-201ENST00000542742 915 ntBASIC-0.48□□□□□ -2.49
VCANP13611 AC080013.4-201ENST00000607624 649 ntBASIC-0.48□□□□□ -2.49
VCANP13611 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC-0.49□□□□□ -2.49
VCANP13611 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.49□□□□□ -2.49
VCANP13611 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.49□□□□□ -2.49
VCANP13611 HMGN1P12-201ENST00000499125 195 ntBASIC-0.49□□□□□ -2.49
VCANP13611 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC-0.49□□□□□ -2.49
VCANP13611 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.49□□□□□ -2.49
VCANP13611 AC104408.1-201ENST00000605241 170 ntBASIC-0.49□□□□□ -2.49
VCANP13611 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC-0.49□□□□□ -2.49
VCANP13611 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
VCANP13611 RPS3AP24-201ENST00000407896 734 ntBASIC-0.49□□□□□ -2.49
VCANP13611 TRIM60P3Y-201ENST00000432201 673 ntBASIC-0.49□□□□□ -2.49
VCANP13611 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.49□□□□□ -2.49
VCANP13611 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.49□□□□□ -2.49
VCANP13611 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC-0.49□□□□□ -2.49
VCANP13611 AC026782.1-201ENST00000512952 449 ntBASIC-0.49□□□□□ -2.49
VCANP13611 AC006157.1-201ENST00000611750 366 ntBASIC-0.49□□□□□ -2.49
VCANP13611 AL138880.2-201ENST00000616214 239 ntBASIC-0.49□□□□□ -2.49
VCANP13611 RNU6-271P-201ENST00000363858 105 ntBASIC-0.49□□□□□ -2.49
VCANP13611 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.49□□□□□ -2.49
VCANP13611 MIR518D-201ENST00000385014 87 ntBASIC-0.49□□□□□ -2.49
VCANP13611 MTND4LP13-201ENST00000425022 298 ntBASIC-0.49□□□□□ -2.49
VCANP13611 MTND2P19-201ENST00000449129 1012 ntBASIC-0.49□□□□□ -2.49
VCANP13611 MTND2P13-201ENST00000577438 1039 ntBASIC-0.49□□□□□ -2.49
VCANP13611 SNORD71-201ENST00000411292 86 ntBASIC-0.5□□□□□ -2.49
VCANP13611 AC009310.1-201ENST00000414414 451 ntBASIC-0.5□□□□□ -2.49
VCANP13611 AL135790.2-201ENST00000437701 267 ntBASIC-0.5□□□□□ -2.49
VCANP13611 MTCO3P2-201ENST00000457365 171 ntBASIC-0.5□□□□□ -2.49
VCANP13611 RNU1-131P-201ENST00000458943 161 ntBASIC-0.5□□□□□ -2.49
VCANP13611 AP004371.1-201ENST00000525240 214 ntBASIC-0.5□□□□□ -2.49
VCANP13611 OR10V3P-201ENST00000525712 725 ntBASIC-0.5□□□□□ -2.49
VCANP13611 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC-0.5□□□□□ -2.49
VCANP13611 AC021749.1-201ENST00000604322 607 ntBASIC-0.5□□□□□ -2.49
VCANP13611 MIR1246-201ENST00000636535 73 ntBASIC-0.5□□□□□ -2.49
VCANP13611 SNORA75.2-201ENST00000391138 150 ntBASIC-0.5□□□□□ -2.49
VCANP13611 MRPL42P4-201ENST00000453267 443 ntBASIC-0.5□□□□□ -2.49
VCANP13611 HSPE1P22-201ENST00000456856 327 ntBASIC-0.5□□□□□ -2.49
VCANP13611 RN7SKP277-201ENST00000516895 283 ntBASIC-0.5□□□□□ -2.49
VCANP13611 AL391099.1-201ENST00000624635 187 ntBASIC-0.5□□□□□ -2.49
VCANP13611 AC092447.10-201ENST00000620607 1652 ntBASIC-0.5□□□□□ -2.49
VCANP13611 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.5□□□□□ -2.49
VCANP13611 RNU6-858P-201ENST00000362436 107 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC027119.1-201ENST00000440877 241 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC018868.1-201ENST00000491307 315 ntBASIC-0.51□□□□□ -2.49
VCANP13611 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC-0.51□□□□□ -2.49
VCANP13611 MIR6076-201ENST00000617521 113 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AP003399.1-201ENST00000637534 361 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC010329.5-201ENST00000623497 2174 ntBASIC-0.51□□□□□ -2.49
VCANP13611 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.51□□□□□ -2.49
VCANP13611 MIR643-201ENST00000385267 97 ntBASIC-0.51□□□□□ -2.49
VCANP13611 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.51□□□□□ -2.49
VCANP13611 MTCO3P18-201ENST00000440206 761 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC024405.2-202ENST00000532731 184 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.51□□□□□ -2.49
VCANP13611 AC092325.1-201ENST00000566449 554 ntBASIC-0.51□□□□□ -2.49
VCANP13611 AL353778.1-201ENST00000603149 408 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms