Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.42□□□□□ -2.02
KRT3P12035 AC012557.2-201ENST00000605919 418 ntBASIC2.42□□□□□ -2.02
KRT3P12035 AP001596.2-201ENST00000608410 312 ntBASIC2.42□□□□□ -2.02
KRT3P12035 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.42□□□□□ -2.02
KRT3P12035 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.42□□□□□ -2.02
KRT3P12035 SCARNA15.3-201ENST00000626315 122 ntBASIC2.42□□□□□ -2.02
KRT3P12035 SCARNA4.1-201ENST00000628597 123 ntBASIC2.42□□□□□ -2.02
KRT3P12035 CDC27P3-201ENST00000635418 1910 ntBASIC2.41□□□□□ -2.02
KRT3P12035 RNU6-1303P-201ENST00000364841 107 ntBASIC2.41□□□□□ -2.02
KRT3P12035 RNU6-384P-201ENST00000364900 104 ntBASIC2.41□□□□□ -2.02
KRT3P12035 RNU6-996P-201ENST00000365438 107 ntBASIC2.41□□□□□ -2.02
KRT3P12035 RNU6-393P-201ENST00000384475 107 ntBASIC2.41□□□□□ -2.02
KRT3P12035 MIR518D-201ENST00000385014 87 ntBASIC2.41□□□□□ -2.02
KRT3P12035 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.41□□□□□ -2.02
KRT3P12035 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.41□□□□□ -2.02
KRT3P12035 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.41□□□□□ -2.02
KRT3P12035 HMGB1P31-201ENST00000437242 427 ntBASIC2.41□□□□□ -2.02
KRT3P12035 RPL7P54-201ENST00000438336 674 ntBASIC2.41□□□□□ -2.02
KRT3P12035 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.41□□□□□ -2.02
KRT3P12035 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.41□□□□□ -2.02
KRT3P12035 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.41□□□□□ -2.02
KRT3P12035 AC104136.1-201ENST00000512969 394 ntBASIC2.41□□□□□ -2.02
KRT3P12035 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
KRT3P12035 AC087241.2-201ENST00000535801 324 ntBASIC2.41□□□□□ -2.02
KRT3P12035 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.41□□□□□ -2.02
KRT3P12035 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.41□□□□□ -2.02
KRT3P12035 AL670379.10-201ENST00000604330 253 ntBASIC2.41□□□□□ -2.02
KRT3P12035 AL670379.9-201ENST00000605428 253 ntBASIC2.41□□□□□ -2.02
KRT3P12035 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
KRT3P12035 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.41□□□□□ -2.02
KRT3P12035 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
KRT3P12035 AL359854.1-201ENST00000614203 1594 ntBASIC2.4□□□□□ -2.02
KRT3P12035 AC138393.1-203ENST00000327086 343 ntBASIC2.4□□□□□ -2.03
KRT3P12035 RNU6-1103P-201ENST00000384150 107 ntBASIC2.4□□□□□ -2.03
KRT3P12035 RNU6-72P-201ENST00000384285 79 ntBASIC2.4□□□□□ -2.03
KRT3P12035 SNORD116-20-201ENST00000384529 92 ntBASIC2.4□□□□□ -2.03
KRT3P12035 SNORA67.4-201ENST00000384688 142 ntBASIC2.4□□□□□ -2.03
KRT3P12035 RNU2-29P-201ENST00000410423 189 ntBASIC2.4□□□□□ -2.03
KRT3P12035 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.4□□□□□ -2.03
KRT3P12035 AC018634.1-201ENST00000437554 401 ntBASIC2.4□□□□□ -2.03
KRT3P12035 CALM1P1-201ENST00000442082 433 ntBASIC2.4□□□□□ -2.03
KRT3P12035 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT3P12035 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.4□□□□□ -2.03
KRT3P12035 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT3P12035 MTAPP1-201ENST00000489154 819 ntBASIC2.4□□□□□ -2.03
KRT3P12035 RPL9P6-201ENST00000492764 598 ntBASIC2.4□□□□□ -2.03
KRT3P12035 RPL22P13-201ENST00000493291 347 ntBASIC2.4□□□□□ -2.03
KRT3P12035 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.4□□□□□ -2.03
KRT3P12035 RNU6-314P-201ENST00000516574 104 ntBASIC2.4□□□□□ -2.03
KRT3P12035 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.4□□□□□ -2.03
KRT3P12035 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT3P12035 AC078814.3-201ENST00000553036 491 ntBASIC2.4□□□□□ -2.03
KRT3P12035 AL021997.1-201ENST00000605757 193 ntBASIC2.4□□□□□ -2.03
KRT3P12035 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT3P12035 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
KRT3P12035 HULC.1-201ENST00000612720 240 ntBASIC2.4□□□□□ -2.03
KRT3P12035 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.4□□□□□ -2.03
KRT3P12035 AL449363.1-201ENST00000617815 186 ntBASIC2.4□□□□□ -2.03
KRT3P12035 uc_338.11-201ENST00000619132 160 ntBASIC2.4□□□□□ -2.03
KRT3P12035 AL031601.2-202ENST00000622650 282 ntBASIC2.4□□□□□ -2.03
KRT3P12035 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.4□□□□□ -2.03
KRT3P12035 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
KRT3P12035 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRT3P12035 AC131280.1-202ENST00000624067 4211 ntBASIC2.4□□□□□ -2.03
KRT3P12035 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRT3P12035 RNA5SP289-201ENST00000362332 137 ntBASIC2.39□□□□□ -2.03
KRT3P12035 RNU6-552P-201ENST00000362869 119 ntBASIC2.39□□□□□ -2.03
KRT3P12035 RNU6-517P-201ENST00000384362 110 ntBASIC2.39□□□□□ -2.03
KRT3P12035 RNU6-748P-201ENST00000384648 107 ntBASIC2.39□□□□□ -2.03
KRT3P12035 RNU6-1158P-201ENST00000391167 107 ntBASIC2.39□□□□□ -2.03
KRT3P12035 RNU6-903P-201ENST00000391270 109 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AL606923.1-201ENST00000406616 190 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.39□□□□□ -2.03
KRT3P12035 PRPS1P1-201ENST00000445305 876 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.39□□□□□ -2.03
KRT3P12035 AL163973.1-201ENST00000484753 577 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC091133.4-201ENST00000511142 308 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AP004607.1-201ENST00000524456 203 ntBASIC2.39□□□□□ -2.03
KRT3P12035 OR5AQ1P-201ENST00000527596 927 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AP000889.2-201ENST00000532684 490 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.39□□□□□ -2.03
KRT3P12035 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC027807.1-201ENST00000559921 996 ntBASIC2.39□□□□□ -2.03
KRT3P12035 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.39□□□□□ -2.03
KRT3P12035 MIR4672-201ENST00000583126 81 ntBASIC2.39□□□□□ -2.03
KRT3P12035 uc_338.14-201ENST00000613162 166 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
KRT3P12035 AC010378.1-201ENST00000619270 362 ntBASIC2.39□□□□□ -2.03
KRT3P12035 MTND5P30-201ENST00000452896 1731 ntBASIC2.39□□□□□ -2.03
KRT3P12035 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRT3P12035 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
KRT3P12035 AC010329.5-201ENST00000623497 2174 ntBASIC2.39□□□□□ -2.03
KRT3P12035 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRT3P12035 Z75746.1-201ENST00000440243 2080 ntBASIC2.38□□□□□ -2.03
KRT3P12035 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
KRT3P12035 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.38□□□□□ -2.03
KRT3P12035 RNU6-37P-201ENST00000362692 107 ntBASIC2.38□□□□□ -2.03
KRT3P12035 RNU6-623P-201ENST00000363143 105 ntBASIC2.38□□□□□ -2.03
KRT3P12035 RNU6-527P-201ENST00000363425 104 ntBASIC2.38□□□□□ -2.03
KRT3P12035 RNU6-1085P-201ENST00000363576 107 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms