Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 Y_RNA.70-201ENST00000362886 110 ntBASIC2.88□□□□□ -1.95
PCNAP12004 SNORA71.1-201ENST00000364523 117 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-867P-201ENST00000364956 107 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-1280P-201ENST00000365211 107 ntBASIC2.88□□□□□ -1.95
PCNAP12004 FTH1P15-201ENST00000406984 280 ntBASIC2.88□□□□□ -1.95
PCNAP12004 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
PCNAP12004 VN1R36P-201ENST00000414936 291 ntBASIC2.88□□□□□ -1.95
PCNAP12004 MTCO3P46-201ENST00000425787 232 ntBASIC2.88□□□□□ -1.95
PCNAP12004 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.88□□□□□ -1.95
PCNAP12004 MTND5P20-201ENST00000448677 143 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AL031274.1-201ENST00000450334 232 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU7-138P-201ENST00000459479 64 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-329P-201ENST00000459618 107 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RPL23AP45-201ENST00000476406 468 ntBASIC2.88□□□□□ -1.95
PCNAP12004 TRBVA-201ENST00000498804 316 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.88□□□□□ -1.95
PCNAP12004 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC116655.1-201ENST00000508324 901 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-864P-201ENST00000516256 108 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU6-256P-201ENST00000516747 97 ntBASIC2.88□□□□□ -1.95
PCNAP12004 RNU7-30P-201ENST00000516835 62 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC069113.1-201ENST00000517763 267 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC104576.1-201ENST00000524225 88 ntBASIC2.88□□□□□ -1.95
PCNAP12004 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
PCNAP12004 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
PCNAP12004 AC005498.1-201ENST00000592125 465 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC009994.1-201ENST00000606889 253 ntBASIC2.88□□□□□ -1.95
PCNAP12004 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.88□□□□□ -1.95
PCNAP12004 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.87□□□□□ -1.95
PCNAP12004 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.87□□□□□ -1.95
PCNAP12004 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PCNAP12004 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
PCNAP12004 RNU6-942P-201ENST00000363002 107 ntBASIC2.87□□□□□ -1.95
PCNAP12004 Y_RNA.184-201ENST00000363884 108 ntBASIC2.87□□□□□ -1.95
PCNAP12004 SNORD81.2-201ENST00000365153 76 ntBASIC2.87□□□□□ -1.95
PCNAP12004 MIR627-201ENST00000384979 97 ntBASIC2.87□□□□□ -1.95
PCNAP12004 MIR767-201ENST00000390228 109 ntBASIC2.87□□□□□ -1.95
PCNAP12004 MTND3P8-201ENST00000412909 339 ntBASIC2.87□□□□□ -1.95
PCNAP12004 SNORD56-201ENST00000413522 71 ntBASIC2.87□□□□□ -1.95
PCNAP12004 AL590632.1-201ENST00000424289 371 ntBASIC2.87□□□□□ -1.95
PCNAP12004 RPL7P37-201ENST00000425095 738 ntBASIC2.87□□□□□ -1.95
PCNAP12004 AC022018.1-201ENST00000430685 241 ntBASIC2.87□□□□□ -1.95
PCNAP12004 AL161651.1-201ENST00000440882 223 ntBASIC2.87□□□□□ -1.95
PCNAP12004 MTCO2P3-201ENST00000442543 421 ntBASIC2.87□□□□□ -1.95
PCNAP12004 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
PCNAP12004 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.87□□□□□ -1.95
PCNAP12004 PPP1R2P5-201ENST00000457256 603 ntBASIC2.87□□□□□ -1.95
PCNAP12004 RPS29P2-201ENST00000479278 136 ntBASIC2.87□□□□□ -1.95
PCNAP12004 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.87□□□□□ -1.95
PCNAP12004 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.87□□□□□ -1.95
PCNAP12004 AC114781.4-201ENST00000513707 639 ntBASIC2.87□□□□□ -1.95
PCNAP12004 RNU6-826P-201ENST00000516827 104 ntBASIC2.87□□□□□ -1.95
PCNAP12004 Y_RNA.702-201ENST00000516843 96 ntBASIC2.87□□□□□ -1.95
PCNAP12004 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.87□□□□□ -1.95
PCNAP12004 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.87□□□□□ -1.95
PCNAP12004 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.87□□□□□ -1.95
PCNAP12004 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.87□□□□□ -1.95
PCNAP12004 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.87□□□□□ -1.95
PCNAP12004 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.87□□□□□ -1.95
PCNAP12004 ELOCP5-201ENST00000604924 333 ntBASIC2.87□□□□□ -1.95
PCNAP12004 AC064836.2-201ENST00000609491 462 ntBASIC2.87□□□□□ -1.95
PCNAP12004 RMST_7.1-201ENST00000621935 268 ntBASIC2.87□□□□□ -1.95
PCNAP12004 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PCNAP12004 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
PCNAP12004 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCNAP12004 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.86□□□□□ -1.95
PCNAP12004 RNU6-858P-201ENST00000362436 107 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RNU6-78P-201ENST00000362897 107 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RNA5SP374-201ENST00000362939 125 ntBASIC2.86□□□□□ -1.95
PCNAP12004 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RNU6-510P-201ENST00000391239 108 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.86□□□□□ -1.95
PCNAP12004 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.86□□□□□ -1.95
PCNAP12004 HIGD1AP2-201ENST00000446367 280 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC117440.1-201ENST00000474107 571 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RPS27AP9-201ENST00000477681 438 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC103975.1-201ENST00000482506 483 ntBASIC2.86□□□□□ -1.95
PCNAP12004 MRPL42P6-201ENST00000486397 371 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC103851.1-201ENST00000506833 274 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC092436.3-201ENST00000511788 257 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RPL39P5-202ENST00000512505 151 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RNU6-875P-201ENST00000516488 106 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RN7SKP40-201ENST00000517211 242 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC087854.1-201ENST00000519706 414 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AP000889.2-201ENST00000532684 490 ntBASIC2.86□□□□□ -1.95
PCNAP12004 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.86□□□□□ -1.95
PCNAP12004 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC138761.3-201ENST00000579993 334 ntBASIC2.86□□□□□ -1.95
PCNAP12004 RPL12P50-201ENST00000603116 116 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AL355877.2-201ENST00000603670 358 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AL137843.1-201ENST00000605078 385 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AL121917.1-203ENST00000605534 577 ntBASIC2.86□□□□□ -1.95
PCNAP12004 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.86□□□□□ -1.95
PCNAP12004 Y_RNA.804-201ENST00000615262 101 ntBASIC2.86□□□□□ -1.95
PCNAP12004 AC097372.5-201ENST00000623665 376 ntBASIC2.86□□□□□ -1.95
PCNAP12004 MIR6733-201ENST00000635723 61 ntBASIC2.86□□□□□ -1.95
PCNAP12004 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms