Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
TOP1P11387 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TOP1P11387 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.18□□□□□ -2.06
TOP1P11387 RNU6-1159P-201ENST00000362933 107 ntBASIC2.18□□□□□ -2.06
TOP1P11387 RNU6-511P-201ENST00000363496 107 ntBASIC2.18□□□□□ -2.06
TOP1P11387 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TOP1P11387 RNU6-1119P-201ENST00000384349 108 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AL512604.1-201ENST00000404812 257 ntBASIC2.18□□□□□ -2.06
TOP1P11387 NDUFS5P1-201ENST00000405668 289 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC007283.2-201ENST00000424739 197 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC104651.1-201ENST00000427559 735 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.18□□□□□ -2.06
TOP1P11387 AC003989.2-201ENST00000440224 169 ntBASIC2.18□□□□□ -2.06
TOP1P11387 RPL7P12-201ENST00000446719 750 ntBASIC2.18□□□□□ -2.06
TOP1P11387 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.18□□□□□ -2.06
TOP1P11387 snoU13.23-201ENST00000458863 104 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC010587.1-201ENST00000505809 469 ntBASIC2.18□□□□□ -2.06
TOP1P11387 MTND3P5-201ENST00000512798 333 ntBASIC2.18□□□□□ -2.06
TOP1P11387 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
TOP1P11387 RNA5SP337-201ENST00000517007 109 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.18□□□□□ -2.06
TOP1P11387 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.18□□□□□ -2.06
TOP1P11387 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.18□□□□□ -2.06
TOP1P11387 AC135279.1-201ENST00000543493 504 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.18□□□□□ -2.06
TOP1P11387 AL096840.1-201ENST00000603287 93 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC121334.2-201ENST00000605387 271 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC068137.4-201ENST00000638485 296 ntBASIC2.18□□□□□ -2.06
TOP1P11387 AC009487.4-201ENST00000624969 3585 ntBASIC2.18□□□□□ -2.06
TOP1P11387 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TOP1P11387 RNU6-512P-201ENST00000364438 103 ntBASIC2.17□□□□□ -2.06
TOP1P11387 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
TOP1P11387 SNORD116-4-201ENST00000384733 96 ntBASIC2.17□□□□□ -2.06
TOP1P11387 RPL23AP32-201ENST00000395315 459 ntBASIC2.17□□□□□ -2.06
TOP1P11387 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
TOP1P11387 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP1P11387 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.17□□□□□ -2.06
TOP1P11387 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP1P11387 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP1P11387 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.17□□□□□ -2.06
TOP1P11387 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.17□□□□□ -2.06
TOP1P11387 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP1P11387 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.17□□□□□ -2.06
TOP1P11387 MTND1P12-201ENST00000455231 147 ntBASIC2.17□□□□□ -2.06
TOP1P11387 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP1P11387 snoU109.1-201ENST00000459339 135 ntBASIC2.17□□□□□ -2.06
TOP1P11387 CKS1BP2-201ENST00000497342 240 ntBASIC2.17□□□□□ -2.06
TOP1P11387 AC107393.1-201ENST00000512403 346 ntBASIC2.17□□□□□ -2.06
TOP1P11387 SMURF2P1-201ENST00000514992 481 ntBASIC2.17□□□□□ -2.06
TOP1P11387 SNORA31.3-201ENST00000516029 96 ntBASIC2.17□□□□□ -2.06
TOP1P11387 RNU6-1220P-201ENST00000517126 108 ntBASIC2.17□□□□□ -2.06
TOP1P11387 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
TOP1P11387 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.17□□□□□ -2.06
TOP1P11387 ARL2BPP2-201ENST00000550907 489 ntBASIC2.17□□□□□ -2.06
TOP1P11387 AGGF1P4-201ENST00000568249 801 ntBASIC2.17□□□□□ -2.06
TOP1P11387 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
TOP1P11387 MTND1P15-201ENST00000579262 949 ntBASIC2.17□□□□□ -2.06
TOP1P11387 MIR3611-201ENST00000584484 83 ntBASIC2.17□□□□□ -2.06
TOP1P11387 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.17□□□□□ -2.06
TOP1P11387 AC006566.1-201ENST00000608943 513 ntBASIC2.17□□□□□ -2.06
TOP1P11387 AC091932.3-201ENST00000624223 323 ntBASIC2.17□□□□□ -2.06
TOP1P11387 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
TOP1P11387 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
TOP1P11387 RNY4P34-201ENST00000364779 95 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.16□□□□□ -2.06
TOP1P11387 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.16□□□□□ -2.06
TOP1P11387 MTND3P17-201ENST00000416968 344 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AL353621.1-201ENST00000418219 243 ntBASIC2.16□□□□□ -2.06
TOP1P11387 ZNF90P2-204ENST00000419323 1075 ntBASIC2.16□□□□□ -2.06
TOP1P11387 RPS15AP12-201ENST00000419498 388 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.16□□□□□ -2.06
TOP1P11387 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.16□□□□□ -2.06
TOP1P11387 ISCA1P6-201ENST00000427740 390 ntBASIC2.16□□□□□ -2.06
TOP1P11387 HMGB1P27-201ENST00000431429 603 ntBASIC2.16□□□□□ -2.06
TOP1P11387 RPL7P54-201ENST00000438336 674 ntBASIC2.16□□□□□ -2.06
TOP1P11387 USP9YP15-201ENST00000442391 422 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC108059.3-201ENST00000456388 214 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.16□□□□□ -2.06
TOP1P11387 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.16□□□□□ -2.06
TOP1P11387 MRPS17P9-201ENST00000511924 393 ntBASIC2.16□□□□□ -2.06
TOP1P11387 SNORA18.6-201ENST00000516792 115 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AP002453.2-201ENST00000533503 320 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.16□□□□□ -2.06
TOP1P11387 AC012213.3-201ENST00000577199 777 ntBASIC2.16□□□□□ -2.06
TOP1P11387 MIR4287-201ENST00000579398 78 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.16□□□□□ -2.06
TOP1P11387 AC004223.2-201ENST00000590309 544 ntBASIC2.16□□□□□ -2.06
TOP1P11387 Z99129.1-201ENST00000612510 255 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC090970.3-201ENST00000612566 866 ntBASIC2.16□□□□□ -2.06
TOP1P11387 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.16□□□□□ -2.06
TOP1P11387 AC006338.1-201ENST00000618453 749 ntBASIC2.16□□□□□ -2.06
TOP1P11387 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TOP1P11387 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.16□□□□□ -2.06
TOP1P11387 FARSBP1-201ENST00000435808 1778 ntBASIC2.15□□□□□ -2.06
TOP1P11387 CENPCP1-201ENST00000533085 2578 ntBASIC2.15□□□□□ -2.06
TOP1P11387 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
TOP1P11387 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
TOP1P11387 RNU6-169P-201ENST00000365336 107 ntBASIC2.15□□□□□ -2.07
TOP1P11387 RNU6-14P-201ENST00000384630 106 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms