Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR3941-201ENST00000582572 103 ntBASIC2.55□□□□□ -2
RAB40ALP0C0E4 AL162413.1-201ENST00000603198 110 ntBASIC2.55□□□□□ -2
RAB40ALP0C0E4 AC008121.1-201ENST00000603244 268 ntBASIC2.55□□□□□ -2
RAB40ALP0C0E4 AC004492.1-201ENST00000607036 742 ntBASIC2.55□□□□□ -2
RAB40ALP0C0E4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
RAB40ALP0C0E4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.55□□□□□ -2
RAB40ALP0C0E4 MIR3529-201ENST00000637713 78 ntBASIC2.55□□□□□ -2
RAB40ALP0C0E4 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
RAB40ALP0C0E4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
RAB40ALP0C0E4 SNORD116-20-201ENST00000384529 92 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 BX682237.1-201ENST00000415016 335 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC092427.1-202ENST00000430569 476 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.54□□□□□ -2
RAB40ALP0C0E4 RPL22P13-201ENST00000493291 347 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 CCDC34P1-201ENST00000507441 517 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.54□□□□□ -2
RAB40ALP0C0E4 SNORA43.2-201ENST00000516652 128 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.54□□□□□ -2
RAB40ALP0C0E4 ZNF519P2-201ENST00000557032 169 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 MTCO3P23-201ENST00000561363 289 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 MIR4424-201ENST00000585257 86 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC002044.1-201ENST00000606707 158 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 YWHAEP7-203ENST00000622054 312 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC138627.2-201ENST00000624202 601 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 AC098679.4-201ENST00000624241 654 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 Z69720.2-201ENST00000624755 279 ntBASIC2.54□□□□□ -2
RAB40ALP0C0E4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RAB40ALP0C0E4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNA5SP68-201ENST00000363885 119 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNU6-266P-201ENST00000364225 107 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNU5E-7P-201ENST00000365290 117 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 MIR218-1-201ENST00000384999 110 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNA5SP219-201ENST00000390940 113 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNU6-648P-201ENST00000410190 107 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 MTCO1P21-201ENST00000416634 589 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 RPL21P2-201ENST00000440049 481 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 MTCO3P38-201ENST00000468910 766 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 AC003982.1-202ENST00000469928 248 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RPL36AP48-201ENST00000485521 314 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNA5SP112-201ENST00000515937 99 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNU5B-3P-201ENST00000516601 115 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RN7SKP40-201ENST00000517211 242 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 CR383656.8-201ENST00000549046 145 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 AL157687.1-201ENST00000554853 619 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 TPRKBP2-201ENST00000565969 475 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 MIR3616-201ENST00000584070 92 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 AC068790.6-201ENST00000602558 258 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RNU6-91P-201ENST00000607774 107 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 MIR7157-201ENST00000635801 60 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.53□□□□□ -2
RAB40ALP0C0E4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RAB40ALP0C0E4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2
RAB40ALP0C0E4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-37P-201ENST00000362692 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-78P-201ENST00000362897 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-486P-201ENST00000363116 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-11P-201ENST00000364234 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 U3.12-201ENST00000364498 214 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-25P-201ENST00000383873 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-1-201ENST00000383898 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-48P-201ENST00000384161 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-36P-201ENST00000384172 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-4P-201ENST00000384205 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-5P-201ENST00000384238 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-3P-201ENST00000384314 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-16P-201ENST00000384385 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-15P-201ENST00000384534 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-2-201ENST00000384627 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-29P-201ENST00000384637 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-9-201ENST00000384776 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RNU6-33P-201ENST00000384793 107 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 MIR181A2-201ENST00000384863 110 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 OR9R1P-201ENST00000412200 877 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 USP9YP27-201ENST00000418455 438 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 AC112220.1-201ENST00000434628 355 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 AL513328.1-201ENST00000446460 224 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 RPS3P1-201ENST00000456781 192 ntBASIC2.52□□□□□ -2.01
RAB40ALP0C0E4 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms