Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SNORD62.1-201ENST00000362541 86 ntBASIC2.65□□□□□ -1.99
CD48P09326 RNU6-395P-201ENST00000365662 106 ntBASIC2.65□□□□□ -1.99
CD48P09326 Y_RNA.480-201ENST00000384364 102 ntBASIC2.65□□□□□ -1.99
CD48P09326 MIR578-201ENST00000384828 96 ntBASIC2.65□□□□□ -1.99
CD48P09326 MIR34A-201ENST00000385130 110 ntBASIC2.65□□□□□ -1.99
CD48P09326 RNA5SP219-201ENST00000390940 113 ntBASIC2.65□□□□□ -1.99
CD48P09326 RPL21P75-201ENST00000396599 483 ntBASIC2.65□□□□□ -1.99
CD48P09326 RPL21P28-201ENST00000401418 483 ntBASIC2.65□□□□□ -1.99
CD48P09326 RNU6-607P-201ENST00000411283 108 ntBASIC2.65□□□□□ -1.99
CD48P09326 AL353621.1-201ENST00000418219 243 ntBASIC2.65□□□□□ -1.99
CD48P09326 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.65□□□□□ -1.99
CD48P09326 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.65□□□□□ -1.99
CD48P09326 RPL21P39-201ENST00000463605 483 ntBASIC2.65□□□□□ -1.99
CD48P09326 AC093591.1-201ENST00000491435 481 ntBASIC2.65□□□□□ -1.99
CD48P09326 RPL21P16-201ENST00000495531 483 ntBASIC2.65□□□□□ -1.99
CD48P09326 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.65□□□□□ -1.99
CD48P09326 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.65□□□□□ -1.99
CD48P09326 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.65□□□□□ -1.99
CD48P09326 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.65□□□□□ -1.99
CD48P09326 SNORA19.2-201ENST00000516013 114 ntBASIC2.65□□□□□ -1.99
CD48P09326 CASP1P1-201ENST00000526345 212 ntBASIC2.65□□□□□ -1.99
CD48P09326 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.65□□□□□ -1.99
CD48P09326 AC026464.5-201ENST00000562497 722 ntBASIC2.65□□□□□ -1.99
CD48P09326 AC073539.2-201ENST00000597113 165 ntBASIC2.65□□□□□ -1.99
CD48P09326 AC087045.1-201ENST00000605856 382 ntBASIC2.65□□□□□ -1.99
CD48P09326 AC116312.1-201ENST00000606841 314 ntBASIC2.65□□□□□ -1.99
CD48P09326 AL132765.2-201ENST00000610812 351 ntBASIC2.65□□□□□ -1.99
CD48P09326 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.65□□□□□ -1.99
CD48P09326 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.65□□□□□ -1.99
CD48P09326 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CD48P09326 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CD48P09326 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CD48P09326 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.64□□□□□ -1.99
CD48P09326 Y_RNA.33-201ENST00000362591 102 ntBASIC2.64□□□□□ -1.99
CD48P09326 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
CD48P09326 RNU1-100P-201ENST00000365255 165 ntBASIC2.64□□□□□ -1.99
CD48P09326 RNU6-1013P-201ENST00000384180 107 ntBASIC2.64□□□□□ -1.99
CD48P09326 Y_RNA.529-201ENST00000384586 119 ntBASIC2.64□□□□□ -1.99
CD48P09326 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CD48P09326 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.64□□□□□ -1.99
CD48P09326 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.64□□□□□ -1.99
CD48P09326 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.64□□□□□ -1.99
CD48P09326 AC007919.1-201ENST00000429380 217 ntBASIC2.64□□□□□ -1.99
CD48P09326 ARL5AP4-201ENST00000430731 512 ntBASIC2.64□□□□□ -1.99
CD48P09326 MYL8P-204ENST00000431574 518 ntBASIC2.64□□□□□ -1.99
CD48P09326 CR769767.1-201ENST00000436337 346 ntBASIC2.64□□□□□ -1.99
CD48P09326 HMGB1P18-201ENST00000438801 619 ntBASIC2.64□□□□□ -1.99
CD48P09326 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CD48P09326 AC092001.1-201ENST00000453012 261 ntBASIC2.64□□□□□ -1.99
CD48P09326 AL135752.1-201ENST00000479477 471 ntBASIC2.64□□□□□ -1.99
CD48P09326 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.64□□□□□ -1.99
CD48P09326 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.64□□□□□ -1.99
CD48P09326 AC103851.1-201ENST00000506833 274 ntBASIC2.64□□□□□ -1.99
CD48P09326 AC105029.1-201ENST00000520250 669 ntBASIC2.64□□□□□ -1.99
CD48P09326 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
CD48P09326 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.64□□□□□ -1.99
CD48P09326 SCOCP1-201ENST00000554676 349 ntBASIC2.64□□□□□ -1.99
CD48P09326 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.64□□□□□ -1.99
CD48P09326 MIR4319-201ENST00000577285 85 ntBASIC2.64□□□□□ -1.99
CD48P09326 LRRC37A5P-203ENST00000580181 585 ntBASIC2.64□□□□□ -1.99
CD48P09326 AC005498.1-201ENST00000592125 465 ntBASIC2.64□□□□□ -1.99
CD48P09326 RPL23AP88-201ENST00000605759 454 ntBASIC2.64□□□□□ -1.99
CD48P09326 DUSP12P1-201ENST00000612874 516 ntBASIC2.64□□□□□ -1.99
CD48P09326 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.64□□□□□ -1.99
CD48P09326 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
CD48P09326 TPTEP1-208ENST00000636884 213 ntBASIC2.64□□□□□ -1.99
CD48P09326 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CD48P09326 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CD48P09326 AC073544.1-201ENST00000600110 1595 ntBASIC2.63□□□□□ -1.99
CD48P09326 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.63□□□□□ -1.99
CD48P09326 RNU4-73P-201ENST00000363164 141 ntBASIC2.63□□□□□ -1.99
CD48P09326 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.63□□□□□ -1.99
CD48P09326 RNU6-217P-201ENST00000384164 104 ntBASIC2.63□□□□□ -1.99
CD48P09326 Y_RNA.509-201ENST00000384506 99 ntBASIC2.63□□□□□ -1.99
CD48P09326 RNU2-3P-201ENST00000410144 191 ntBASIC2.63□□□□□ -1.99
CD48P09326 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
CD48P09326 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.63□□□□□ -1.99
CD48P09326 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.63□□□□□ -1.99
CD48P09326 BRK1P2-201ENST00000442875 223 ntBASIC2.63□□□□□ -1.99
CD48P09326 NDUFB1P2-201ENST00000449477 176 ntBASIC2.63□□□□□ -1.99
CD48P09326 CECR9-201ENST00000453421 199 ntBASIC2.63□□□□□ -1.99
CD48P09326 MTCO1P29-201ENST00000496868 288 ntBASIC2.63□□□□□ -1.99
CD48P09326 SNORA25.17-201ENST00000517184 124 ntBASIC2.63□□□□□ -1.99
CD48P09326 AC009902.1-201ENST00000519351 183 ntBASIC2.63□□□□□ -1.99
CD48P09326 AP000889.2-201ENST00000532684 490 ntBASIC2.63□□□□□ -1.99
CD48P09326 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.63□□□□□ -1.99
CD48P09326 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.63□□□□□ -1.99
CD48P09326 MIR3672-201ENST00000584290 82 ntBASIC2.63□□□□□ -1.99
CD48P09326 MIR3942-201ENST00000585264 109 ntBASIC2.63□□□□□ -1.99
CD48P09326 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.63□□□□□ -1.99
CD48P09326 MIR7106-201ENST00000612419 65 ntBASIC2.63□□□□□ -1.99
CD48P09326 AC104237.2-201ENST00000612456 443 ntBASIC2.63□□□□□ -1.99
CD48P09326 RMST_4.1-201ENST00000616886 107 ntBASIC2.63□□□□□ -1.99
CD48P09326 AC027309.3-201ENST00000623419 351 ntBASIC2.63□□□□□ -1.99
CD48P09326 AC112487.2-201ENST00000637950 304 ntBASIC2.63□□□□□ -1.99
CD48P09326 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.63□□□□□ -1.99
CD48P09326 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.63□□□□□ -1.99
CD48P09326 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.63□□□□□ -1.99
CD48P09326 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CD48P09326 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 245.3 ms