Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Z98742.2-201ENST00000431564 187 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 HMGB3P12-201ENST00000438745 556 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC4P09017 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC4P09017 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC4P09017 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC4P09017 snoU13.26-201ENST00000459452 105 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC006512.1-201ENST00000468816 291 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC010631.1-201ENST00000474150 156 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXC4P09017 AL160314.1-201ENST00000490836 438 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HOXC4P09017 PRDX4P1-201ENST00000507189 574 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC4P09017 AC074344.1-201ENST00000512823 224 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 RNA5SP401-201ENST00000515920 127 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC4P09017 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC4P09017 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC4P09017 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXC4P09017 AL359212.1-201ENST00000556608 614 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.13□□□□□ -2.07
HOXC4P09017 BNIP3P30-201ENST00000601184 574 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC008536.2-201ENST00000607284 349 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXC4P09017 DUXAP9-208ENST00000622815 614 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 AC099654.14-201ENST00000638599 341 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.13□□□□□ -2.07
HOXC4P09017 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC4P09017 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC4P09017 CASC19-280ENST00000642102 1351 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXC4P09017 RNU6-1097P-201ENST00000363586 107 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RNU5E-4P-201ENST00000364931 120 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RNU5E-6P-201ENST00000365574 115 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 SNORA69-201ENST00000383895 132 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 SNORA51.11-201ENST00000384442 131 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 SNORA64-201ENST00000384674 134 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RNU6-606P-201ENST00000384721 111 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RNU6-1068P-201ENST00000410958 103 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC4P09017 RPL21P24-201ENST00000413752 448 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXC4P09017 AC096649.2-201ENST00000416186 393 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 MTCYBP8-201ENST00000422855 651 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC137499.1-201ENST00000427602 88 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC016691.1-201ENST00000441321 413 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC010095.1-201ENST00000443543 144 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AL118520.1-201ENST00000450770 291 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC4P09017 RPL31P58-201ENST00000469001 379 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC083798.1-201ENST00000472671 131 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXC4P09017 EIF4EP3-201ENST00000498782 656 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC4P09017 SNORA40.12-201ENST00000516329 111 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RNU6-410P-201ENST00000517006 107 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXC4P09017 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXC4P09017 HIF1AP1-201ENST00000553642 175 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AL121579.1-201ENST00000555129 305 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AL356280.1-201ENST00000603614 379 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC008945.2-201ENST00000606056 604 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 RMST_3.1-201ENST00000611651 109 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AL354950.2-201ENST00000617939 290 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 YWHAEP7-203ENST00000622054 312 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 MIR3662-201ENST00000637030 95 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 AC024614.3-201ENST00000637860 256 ntBASIC2.12□□□□□ -2.07
HOXC4P09017 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HOXC4P09017 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HOXC4P09017 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HOXC4P09017 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC4P09017 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HOXC4P09017 AC010329.5-201ENST00000623497 2174 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 SNORD114-1-201ENST00000362705 72 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 RNU6-451P-201ENST00000362921 107 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 RNU6-884P-201ENST00000363889 107 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 SNORA62.1-201ENST00000364287 154 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 RNU6-1322P-201ENST00000364309 107 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 MT-TL1-201ENST00000386347 75 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HOXC4P09017 RN7SKP32-201ENST00000410167 303 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 OR9R1P-201ENST00000412200 877 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 AC138393.2-201ENST00000414742 246 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.11□□□□□ -2.07
HOXC4P09017 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC4P09017 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC4P09017 IPO7P1-201ENST00000442031 636 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 AC233279.1-201ENST00000455300 423 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 RPL12P25-201ENST00000455592 494 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 AC022364.2-201ENST00000457963 554 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXC4P09017 AC008481.1-201ENST00000463278 396 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC4P09017 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXC4P09017 RNU5F-8P-201ENST00000515941 111 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 RNU6-507P-201ENST00000516045 100 ntBASIC2.11□□□□□ -2.07
HOXC4P09017 RNU6-358P-201ENST00000516564 75 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms