Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL121594.1-201ENST00000475906 575 ntBASIC0.92□□□□□ -2.26
CTSDP07339 AL163540.1-201ENST00000485382 386 ntBASIC0.92□□□□□ -2.26
CTSDP07339 AC108729.1-201ENST00000487812 947 ntBASIC0.92□□□□□ -2.26
CTSDP07339 RNU6-1315P-201ENST00000517187 99 ntBASIC0.92□□□□□ -2.26
CTSDP07339 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CTSDP07339 AC018630.3-201ENST00000542637 96 ntBASIC0.92□□□□□ -2.26
CTSDP07339 AC084364.2-201ENST00000546924 395 ntBASIC0.92□□□□□ -2.26
CTSDP07339 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.92□□□□□ -2.26
CTSDP07339 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.92□□□□□ -2.26
CTSDP07339 AC112220.2-201ENST00000605513 533 ntBASIC0.92□□□□□ -2.26
CTSDP07339 MIR6078-201ENST00000611069 100 ntBASIC0.92□□□□□ -2.26
CTSDP07339 AC009269.6-201ENST00000621778 588 ntBASIC0.92□□□□□ -2.26
CTSDP07339 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.92□□□□□ -2.26
CTSDP07339 MTND5P42-201ENST00000637720 498 ntBASIC0.92□□□□□ -2.26
CTSDP07339 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CTSDP07339 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CTSDP07339 SNORA63.3-201ENST00000362682 132 ntBASIC0.91□□□□□ -2.26
CTSDP07339 Y_RNA.99-201ENST00000363138 105 ntBASIC0.91□□□□□ -2.26
CTSDP07339 SNORA22-201ENST00000383907 134 ntBASIC0.91□□□□□ -2.26
CTSDP07339 SNORA22C-201ENST00000384614 134 ntBASIC0.91□□□□□ -2.26
CTSDP07339 RNU1-78P-201ENST00000391248 165 ntBASIC0.91□□□□□ -2.26
CTSDP07339 Y_RNA.595-201ENST00000410403 105 ntBASIC0.91□□□□□ -2.26
CTSDP07339 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.91□□□□□ -2.26
CTSDP07339 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.91□□□□□ -2.26
CTSDP07339 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.91□□□□□ -2.26
CTSDP07339 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.91□□□□□ -2.26
CTSDP07339 TOMM22P2-201ENST00000430735 237 ntBASIC0.91□□□□□ -2.26
CTSDP07339 RPS6P15-201ENST00000431996 751 ntBASIC0.91□□□□□ -2.26
CTSDP07339 MTCO3P5-201ENST00000433620 714 ntBASIC0.91□□□□□ -2.26
CTSDP07339 AL590365.1-201ENST00000450788 243 ntBASIC0.91□□□□□ -2.26
CTSDP07339 OR2A41P-201ENST00000473586 105 ntBASIC0.91□□□□□ -2.26
CTSDP07339 RNA5SP216-201ENST00000516111 123 ntBASIC0.91□□□□□ -2.26
CTSDP07339 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.91□□□□□ -2.26
CTSDP07339 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.91□□□□□ -2.26
CTSDP07339 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.91□□□□□ -2.26
CTSDP07339 AC103810.9-201ENST00000606688 112 ntBASIC0.91□□□□□ -2.26
CTSDP07339 snoU13.31-201ENST00000607291 104 ntBASIC0.91□□□□□ -2.26
CTSDP07339 AC123767.1-202ENST00000620407 817 ntBASIC0.91□□□□□ -2.26
CTSDP07339 AP000943.4-201ENST00000622912 357 ntBASIC0.91□□□□□ -2.26
CTSDP07339 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.91□□□□□ -2.26
CTSDP07339 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.9□□□□□ -2.26
CTSDP07339 AC092125.1-201ENST00000562568 1995 ntBASIC0.9□□□□□ -2.26
CTSDP07339 RNA5SP432-201ENST00000362480 116 ntBASIC0.9□□□□□ -2.27
CTSDP07339 RNU6-1210P-201ENST00000363775 107 ntBASIC0.9□□□□□ -2.27
CTSDP07339 RNU6-944P-201ENST00000364023 107 ntBASIC0.9□□□□□ -2.27
CTSDP07339 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.9□□□□□ -2.27
CTSDP07339 CBX3P9-201ENST00000402326 552 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.9□□□□□ -2.27
CTSDP07339 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.9□□□□□ -2.27
CTSDP07339 UBE2V1P10-201ENST00000414685 269 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AC016831.2-201ENST00000417179 352 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.9□□□□□ -2.27
CTSDP07339 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.9□□□□□ -2.27
CTSDP07339 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.9□□□□□ -2.27
CTSDP07339 AL606517.1-201ENST00000446914 387 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.9□□□□□ -2.27
CTSDP07339 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.9□□□□□ -2.27
CTSDP07339 snoU13.9-201ENST00000458927 103 ntBASIC0.9□□□□□ -2.27
CTSDP07339 MTND1P3-201ENST00000484956 952 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.9□□□□□ -2.27
CTSDP07339 AC025465.3-201ENST00000510570 311 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AC079395.1-201ENST00000510981 262 ntBASIC0.9□□□□□ -2.27
CTSDP07339 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.9□□□□□ -2.27
CTSDP07339 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.9□□□□□ -2.27
CTSDP07339 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.9□□□□□ -2.27
CTSDP07339 AL157871.3-201ENST00000557231 293 ntBASIC0.9□□□□□ -2.27
CTSDP07339 MIR1273C-201ENST00000578669 77 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AP001004.1-201ENST00000582468 324 ntBASIC0.9□□□□□ -2.27
CTSDP07339 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.9□□□□□ -2.27
CTSDP07339 MIR4295-201ENST00000585286 85 ntBASIC0.9□□□□□ -2.27
CTSDP07339 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CTSDP07339 AC097468.3-201ENST00000607956 456 ntBASIC0.9□□□□□ -2.27
CTSDP07339 Y_RNA.33-201ENST00000362591 102 ntBASIC0.89□□□□□ -2.27
CTSDP07339 SNORA4.3-201ENST00000365564 137 ntBASIC0.89□□□□□ -2.27
CTSDP07339 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CTSDP07339 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CTSDP07339 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
CTSDP07339 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.89□□□□□ -2.27
CTSDP07339 MIR29B2-201ENST00000385055 81 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.89□□□□□ -2.27
CTSDP07339 FCF1P10-201ENST00000407590 479 ntBASIC0.89□□□□□ -2.27
CTSDP07339 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AC009518.2-201ENST00000418056 731 ntBASIC0.89□□□□□ -2.27
CTSDP07339 NCOR1P3-201ENST00000420479 303 ntBASIC0.89□□□□□ -2.27
CTSDP07339 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.89□□□□□ -2.27
CTSDP07339 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.89□□□□□ -2.27
CTSDP07339 AL591212.2-201ENST00000433923 257 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AL035666.1-201ENST00000446195 348 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.89□□□□□ -2.27
CTSDP07339 HMGB1P30-201ENST00000492455 606 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AC093852.1-201ENST00000503587 266 ntBASIC0.89□□□□□ -2.27
CTSDP07339 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.89□□□□□ -2.27
CTSDP07339 AC109445.1-201ENST00000512356 383 ntBASIC0.89□□□□□ -2.27
CTSDP07339 RNVU1-2-201ENST00000516326 135 ntBASIC0.89□□□□□ -2.27
CTSDP07339 RNU6-965P-201ENST00000516721 96 ntBASIC0.89□□□□□ -2.27
CTSDP07339 RNU6-914P-201ENST00000516749 109 ntBASIC0.89□□□□□ -2.27
CTSDP07339 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.89□□□□□ -2.27
CTSDP07339 AP000907.2-201ENST00000530827 353 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AP003034.1-201ENST00000534621 422 ntBASIC0.89□□□□□ -2.27
CTSDP07339 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms