Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.64□□□□□ -2.15
CD74P04233 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
CD74P04233 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CD74P04233 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.64□□□□□ -2.15
CD74P04233 CLIC4P2-201ENST00000601934 717 ntBASIC1.64□□□□□ -2.15
CD74P04233 AC090578.1-201ENST00000604955 591 ntBASIC1.64□□□□□ -2.15
CD74P04233 AL139286.2-201ENST00000606838 396 ntBASIC1.64□□□□□ -2.15
CD74P04233 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.64□□□□□ -2.15
CD74P04233 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.64□□□□□ -2.15
CD74P04233 AC108479.2-201ENST00000617314 601 ntBASIC1.64□□□□□ -2.15
CD74P04233 AC010378.1-201ENST00000619270 362 ntBASIC1.64□□□□□ -2.15
CD74P04233 ZNF702P-202ENST00000434269 1966 ntBASIC1.64□□□□□ -2.15
CD74P04233 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CD74P04233 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CD74P04233 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CD74P04233 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CD74P04233 U3.4-201ENST00000363352 213 ntBASIC1.63□□□□□ -2.15
CD74P04233 RNU6-61P-201ENST00000365528 109 ntBASIC1.63□□□□□ -2.15
CD74P04233 RNU5A-2P-201ENST00000384337 116 ntBASIC1.63□□□□□ -2.15
CD74P04233 MIR10A-201ENST00000385043 110 ntBASIC1.63□□□□□ -2.15
CD74P04233 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CD74P04233 Y_RNA.623-201ENST00000411128 95 ntBASIC1.63□□□□□ -2.15
CD74P04233 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.63□□□□□ -2.15
CD74P04233 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.63□□□□□ -2.15
CD74P04233 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.63□□□□□ -2.15
CD74P04233 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.63□□□□□ -2.15
CD74P04233 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.63□□□□□ -2.15
CD74P04233 AL365338.1-201ENST00000422282 858 ntBASIC1.63□□□□□ -2.15
CD74P04233 DPH3P2-201ENST00000422618 250 ntBASIC1.63□□□□□ -2.15
CD74P04233 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.63□□□□□ -2.15
CD74P04233 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.63□□□□□ -2.15
CD74P04233 RPS6P15-201ENST00000431996 751 ntBASIC1.63□□□□□ -2.15
CD74P04233 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.63□□□□□ -2.15
CD74P04233 MTATP6P16-201ENST00000434543 526 ntBASIC1.63□□□□□ -2.15
CD74P04233 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.63□□□□□ -2.15
CD74P04233 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.63□□□□□ -2.15
CD74P04233 RPL7P12-201ENST00000446719 750 ntBASIC1.63□□□□□ -2.15
CD74P04233 GAPDHP17-201ENST00000449858 1001 ntBASIC1.63□□□□□ -2.15
CD74P04233 AL033528.1-201ENST00000453780 140 ntBASIC1.63□□□□□ -2.15
CD74P04233 SNRPFP4-201ENST00000456366 242 ntBASIC1.63□□□□□ -2.15
CD74P04233 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.63□□□□□ -2.15
CD74P04233 snoU109.1-201ENST00000459339 135 ntBASIC1.63□□□□□ -2.15
CD74P04233 snoU13.26-201ENST00000459452 105 ntBASIC1.63□□□□□ -2.15
CD74P04233 AC140059.1-201ENST00000489238 361 ntBASIC1.63□□□□□ -2.15
CD74P04233 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.63□□□□□ -2.15
CD74P04233 AC112206.3-201ENST00000514578 389 ntBASIC1.63□□□□□ -2.15
CD74P04233 AP002453.2-201ENST00000533503 320 ntBASIC1.63□□□□□ -2.15
CD74P04233 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.63□□□□□ -2.15
CD74P04233 AC087883.1-201ENST00000551882 391 ntBASIC1.63□□□□□ -2.15
CD74P04233 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.63□□□□□ -2.15
CD74P04233 AC026464.5-201ENST00000562497 722 ntBASIC1.63□□□□□ -2.15
CD74P04233 AC012414.6-201ENST00000568241 401 ntBASIC1.63□□□□□ -2.15
CD74P04233 MIR3122-201ENST00000577243 73 ntBASIC1.63□□□□□ -2.15
CD74P04233 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
CD74P04233 MIR548AC-201ENST00000585049 88 ntBASIC1.63□□□□□ -2.15
CD74P04233 SEPT7P9-203ENST00000604116 343 ntBASIC1.63□□□□□ -2.15
CD74P04233 AL355297.2-201ENST00000604792 129 ntBASIC1.63□□□□□ -2.15
CD74P04233 MIR98-201ENST00000606724 119 ntBASIC1.63□□□□□ -2.15
CD74P04233 U6.42-201ENST00000618440 107 ntBASIC1.63□□□□□ -2.15
CD74P04233 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CD74P04233 RNU6-179P-201ENST00000363350 107 ntBASIC1.62□□□□□ -2.15
CD74P04233 RNU6-297P-201ENST00000384636 107 ntBASIC1.62□□□□□ -2.15
CD74P04233 MIR578-201ENST00000384828 96 ntBASIC1.62□□□□□ -2.15
CD74P04233 BX295541.1-201ENST00000417774 250 ntBASIC1.62□□□□□ -2.15
CD74P04233 C1DP2-201ENST00000418167 426 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
CD74P04233 AC097463.2-201ENST00000421074 142 ntBASIC1.62□□□□□ -2.15
CD74P04233 PGBD4P6-201ENST00000421501 610 ntBASIC1.62□□□□□ -2.15
CD74P04233 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
CD74P04233 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.62□□□□□ -2.15
CD74P04233 CALM2P2-201ENST00000428512 440 ntBASIC1.62□□□□□ -2.15
CD74P04233 RPL31P35-201ENST00000431058 377 ntBASIC1.62□□□□□ -2.15
CD74P04233 MTND1P26-201ENST00000440488 538 ntBASIC1.62□□□□□ -2.15
CD74P04233 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
CD74P04233 AC003071.1-201ENST00000451219 789 ntBASIC1.62□□□□□ -2.15
CD74P04233 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CD74P04233 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.62□□□□□ -2.15
CD74P04233 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
CD74P04233 MTCYBP1-201ENST00000454315 1119 ntBASIC1.62□□□□□ -2.15
CD74P04233 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.62□□□□□ -2.15
CD74P04233 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
CD74P04233 BET1P1-201ENST00000482276 359 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.62□□□□□ -2.15
CD74P04233 AC116562.3-201ENST00000506136 177 ntBASIC1.62□□□□□ -2.15
CD74P04233 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CD74P04233 AC068587.5-201ENST00000528506 175 ntBASIC1.62□□□□□ -2.15
CD74P04233 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.62□□□□□ -2.15
CD74P04233 AP000873.5-201ENST00000533906 236 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.62□□□□□ -2.15
CD74P04233 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
CD74P04233 MIR3682-201ENST00000581338 84 ntBASIC1.62□□□□□ -2.15
CD74P04233 AC008521.1-201ENST00000587471 187 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL670379.10-201ENST00000604330 253 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL022154.1-201ENST00000604698 785 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL670379.9-201ENST00000605428 253 ntBASIC1.62□□□□□ -2.15
CD74P04233 AP001506.1-201ENST00000615444 211 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL359757.2-201ENST00000624309 274 ntBASIC1.62□□□□□ -2.15
CD74P04233 AL359740.1-201ENST00000624340 592 ntBASIC1.62□□□□□ -2.15
CD74P04233 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms