Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL3A1P02461 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.46□□□□□ -1.86
COL3A1P02461 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL3A1P02461 SNORD62.1-201ENST00000362541 86 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL3A1P02461 Y_RNA.404-201ENST00000383978 102 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 Y_RNA.447-201ENST00000384184 113 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 Y_RNA.496-201ENST00000384444 101 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL3A1P02461 RNU2-36P-201ENST00000410361 191 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 RNU2-64P-201ENST00000411315 191 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AL159169.1-201ENST00000421119 127 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 OSTCP8-201ENST00000445117 448 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 COX7A2P2-201ENST00000505291 250 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 Y_RNA.670-201ENST00000516255 105 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 RNU6-307P-201ENST00000516743 106 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AC022616.4-201ENST00000522985 181 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.46□□□□□ -1.86
COL3A1P02461 MIR4769-201ENST00000584126 77 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AC005899.2-201ENST00000584353 90 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AC092447.9-201ENST00000603395 144 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AC018462.2-201ENST00000605375 395 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 U2.17-201ENST00000611454 95 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AC141273.2-201ENST00000618989 130 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 AL136313.1-201ENST00000624804 202 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.46□□□□□ -1.86
COL3A1P02461 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL3A1P02461 ZNF33CP-201ENST00000432492 2030 ntBASIC3.46□□□□□ -1.86
COL3A1P02461 GABPAP-201ENST00000419271 1356 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL3A1P02461 RNU6-874P-201ENST00000362390 105 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 SNORD82-201ENST00000365530 70 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 RNU6-1062P-201ENST00000383908 107 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AL512633.1-201ENST00000399931 655 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 Y_RNA.594-201ENST00000410373 140 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 RNU2-15P-201ENST00000410692 191 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.45□□□□□ -1.86
COL3A1P02461 RPL35AP22-201ENST00000436855 335 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 HIGD1AP11-201ENST00000438361 280 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 RPS15AP27-201ENST00000449183 343 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AL353691.1-201ENST00000451332 387 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AC133134.1-201ENST00000466800 359 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.45□□□□□ -1.86
COL3A1P02461 RNU6-475P-201ENST00000516073 104 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AC007375.1-201ENST00000554513 578 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AL133153.1-201ENST00000557756 303 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AC010620.2-201ENST00000600135 313 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 PSMA6P4-201ENST00000603247 718 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 AL355297.3-201ENST00000604082 446 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 IGHVIII-44-202ENST00000636235 289 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.45□□□□□ -1.86
COL3A1P02461 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.45□□□□□ -1.86
COL3A1P02461 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
COL3A1P02461 AC091812.1-201ENST00000432235 1948 ntBASIC3.45□□□□□ -1.86
COL3A1P02461 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL3A1P02461 AC016717.2-201ENST00000609089 5141 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL3A1P02461 AC103710.2-202ENST00000641454 2853 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL3A1P02461 RNU6-188P-201ENST00000364207 107 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 Y_RNA.288-201ENST00000364854 92 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RNU6-1127P-201ENST00000384580 107 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RNU6-823P-201ENST00000391042 103 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RNU6-550P-201ENST00000391057 101 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RNU2-23P-201ENST00000410545 195 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 EZH2P1-201ENST00000431167 291 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RPL23AP50-201ENST00000434149 455 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.44□□□□□ -1.86
COL3A1P02461 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.44□□□□□ -1.86
COL3A1P02461 HMGB3P21-201ENST00000452483 547 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.44□□□□□ -1.86
COL3A1P02461 RPL23AP55-201ENST00000498163 452 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RNU2-53P-201ENST00000516257 147 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RNU6-1092P-201ENST00000516955 87 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 RANP3-201ENST00000530970 276 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.44□□□□□ -1.86
COL3A1P02461 AL358913.1-201ENST00000554342 121 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 AC023813.4-201ENST00000607580 580 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 MIR8062-201ENST00000621515 85 ntBASIC3.44□□□□□ -1.86
COL3A1P02461 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
COL3A1P02461 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.44□□□□□ -1.86
COL3A1P02461 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COL3A1P02461 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.43□□□□□ -1.86
COL3A1P02461 MTND5P7-201ENST00000413558 1798 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
COL3A1P02461 XIAPP3-201ENST00000312918 795 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 Y_RNA.2-201ENST00000362330 96 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 RNU6-1078P-201ENST00000364522 103 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 RPLP0P7-201ENST00000416050 667 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.43□□□□□ -1.86
COL3A1P02461 AC009965.2-201ENST00000425328 970 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 USMG5P1-201ENST00000425964 177 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AL031736.2-201ENST00000426573 787 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.43□□□□□ -1.86
COL3A1P02461 AC009969.1-201ENST00000438726 172 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 DYNLT3P2-201ENST00000442517 295 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AC022493.2-201ENST00000506122 481 ntBASIC3.43□□□□□ -1.86
COL3A1P02461 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.43□□□□□ -1.86
COL3A1P02461 SNORA14.1-201ENST00000516113 141 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms