Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
MBD4O95243 SNORD114-19-201ENST00000363072 75 ntBASIC2.93□□□□□ -1.94
MBD4O95243 RNU4-40P-201ENST00000364351 143 ntBASIC2.93□□□□□ -1.94
MBD4O95243 RNU5E-7P-201ENST00000365290 117 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD4O95243 UBE2V1P10-201ENST00000414685 269 ntBASIC2.93□□□□□ -1.94
MBD4O95243 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.93□□□□□ -1.94
MBD4O95243 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD4O95243 AL353193.1-201ENST00000421444 268 ntBASIC2.93□□□□□ -1.94
MBD4O95243 RPS3AP44-201ENST00000425466 790 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MBD4O95243 RPL7P12-201ENST00000446719 750 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AC073415.1-201ENST00000449240 153 ntBASIC2.93□□□□□ -1.94
MBD4O95243 SCARNA18-201ENST00000459004 134 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AC090096.1-201ENST00000489168 390 ntBASIC2.93□□□□□ -1.94
MBD4O95243 MTCO3P9-201ENST00000506989 781 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.93□□□□□ -1.94
MBD4O95243 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD4O95243 SMURF2P1-201ENST00000514992 481 ntBASIC2.93□□□□□ -1.94
MBD4O95243 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AL512310.1-201ENST00000548639 172 ntBASIC2.93□□□□□ -1.94
MBD4O95243 HIF1AP1-201ENST00000553642 175 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AC136619.2-201ENST00000563361 631 ntBASIC2.93□□□□□ -1.94
MBD4O95243 MTCYBP33-201ENST00000575007 1130 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD4O95243 AP001330.5-201ENST00000607176 411 ntBASIC2.93□□□□□ -1.94
MBD4O95243 AC103591.3-201ENST00000608684 209 ntBASIC2.93□□□□□ -1.94
MBD4O95243 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.93□□□□□ -1.94
MBD4O95243 OR5AK4P-201ENST00000635912 903 ntBASIC2.93□□□□□ -1.94
MBD4O95243 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
MBD4O95243 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MBD4O95243 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD4O95243 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
MBD4O95243 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
MBD4O95243 Y_RNA.324-201ENST00000365165 102 ntBASIC2.92□□□□□ -1.94
MBD4O95243 Y_RNA.481-201ENST00000384373 102 ntBASIC2.92□□□□□ -1.94
MBD4O95243 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
MBD4O95243 RNU6-1158P-201ENST00000391167 107 ntBASIC2.92□□□□□ -1.94
MBD4O95243 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD4O95243 AC138623.1-201ENST00000418060 216 ntBASIC2.92□□□□□ -1.94
MBD4O95243 MTCYBP8-201ENST00000422855 651 ntBASIC2.92□□□□□ -1.94
MBD4O95243 DNAJC19P4-201ENST00000440115 345 ntBASIC2.92□□□□□ -1.94
MBD4O95243 PRPS1P1-201ENST00000445305 876 ntBASIC2.92□□□□□ -1.94
MBD4O95243 RNU7-26P-201ENST00000458980 63 ntBASIC2.92□□□□□ -1.94
MBD4O95243 AC117503.1-201ENST00000472241 394 ntBASIC2.92□□□□□ -1.94
MBD4O95243 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD4O95243 AC107401.1-201ENST00000503426 685 ntBASIC2.92□□□□□ -1.94
MBD4O95243 AC234781.5-201ENST00000508429 271 ntBASIC2.92□□□□□ -1.94
MBD4O95243 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.92□□□□□ -1.94
MBD4O95243 SNORA25.11-201ENST00000515935 105 ntBASIC2.92□□□□□ -1.94
MBD4O95243 RNU2-69P-201ENST00000516061 100 ntBASIC2.92□□□□□ -1.94
MBD4O95243 MTCO3P23-201ENST00000561363 289 ntBASIC2.92□□□□□ -1.94
MBD4O95243 AC093788.1-201ENST00000609356 927 ntBASIC2.92□□□□□ -1.94
MBD4O95243 AL354950.2-201ENST00000617939 290 ntBASIC2.92□□□□□ -1.94
MBD4O95243 AL158209.2-201ENST00000619266 216 ntBASIC2.92□□□□□ -1.94
MBD4O95243 RMST_7.1-201ENST00000621935 268 ntBASIC2.92□□□□□ -1.94
MBD4O95243 Z69720.2-201ENST00000624755 279 ntBASIC2.92□□□□□ -1.94
MBD4O95243 FO624990.1-201ENST00000636373 85 ntBASIC2.92□□□□□ -1.94
MBD4O95243 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.92□□□□□ -1.94
MBD4O95243 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
MBD4O95243 RNU6-1010P-201ENST00000362757 107 ntBASIC2.91□□□□□ -1.94
MBD4O95243 RNU6-78P-201ENST00000362897 107 ntBASIC2.91□□□□□ -1.94
MBD4O95243 Y_RNA.255-201ENST00000364581 97 ntBASIC2.91□□□□□ -1.94
MBD4O95243 Y_RNA.399-201ENST00000383955 105 ntBASIC2.91□□□□□ -1.94
MBD4O95243 RNU6-1072P-201ENST00000384703 107 ntBASIC2.91□□□□□ -1.94
MBD4O95243 RNU6-443P-201ENST00000384780 107 ntBASIC2.91□□□□□ -1.94
MBD4O95243 SNORA16.2-201ENST00000390991 127 ntBASIC2.91□□□□□ -1.94
MBD4O95243 RPS4XP7-201ENST00000406274 780 ntBASIC2.91□□□□□ -1.94
MBD4O95243 SNORA11.2-201ENST00000408318 127 ntBASIC2.91□□□□□ -1.94
MBD4O95243 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.91□□□□□ -1.94
MBD4O95243 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.91□□□□□ -1.94
MBD4O95243 MTCO2P7-201ENST00000446518 666 ntBASIC2.91□□□□□ -1.94
MBD4O95243 AIG1P1-201ENST00000503376 148 ntBASIC2.91□□□□□ -1.94
MBD4O95243 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD4O95243 SNORA40.12-201ENST00000516329 111 ntBASIC2.91□□□□□ -1.94
MBD4O95243 AC109329.1-201ENST00000518744 317 ntBASIC2.91□□□□□ -1.94
MBD4O95243 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.91□□□□□ -1.94
MBD4O95243 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.91□□□□□ -1.94
MBD4O95243 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.91□□□□□ -1.94
MBD4O95243 AL121917.1-203ENST00000605534 577 ntBASIC2.91□□□□□ -1.94
MBD4O95243 AC093783.1-201ENST00000612976 329 ntBASIC2.91□□□□□ -1.94
MBD4O95243 MIR6863-201ENST00000636112 90 ntBASIC2.91□□□□□ -1.94
MBD4O95243 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
MBD4O95243 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
MBD4O95243 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
MBD4O95243 RNU6-623P-201ENST00000363143 105 ntBASIC2.9□□□□□ -1.95
MBD4O95243 RNU6-1322P-201ENST00000364309 107 ntBASIC2.9□□□□□ -1.95
MBD4O95243 Y_RNA.436-201ENST00000384097 102 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.9□□□□□ -1.95
MBD4O95243 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.9□□□□□ -1.95
MBD4O95243 AC016907.1-201ENST00000419483 435 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AL139413.1-201ENST00000421309 217 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.9□□□□□ -1.95
MBD4O95243 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.9□□□□□ -1.95
MBD4O95243 RN7SL636P-201ENST00000497504 294 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.9□□□□□ -1.95
MBD4O95243 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.9□□□□□ -1.95
MBD4O95243 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.9□□□□□ -1.95
MBD4O95243 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
MBD4O95243 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms