Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RTN3O95197 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.9□□□□□ -1.94
RTN3O95197 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
RTN3O95197 RNU1-138P-201ENST00000384093 164 ntBASIC2.9□□□□□ -1.95
RTN3O95197 RNU6-843P-201ENST00000384454 104 ntBASIC2.9□□□□□ -1.95
RTN3O95197 SNORD116-20-201ENST00000384529 92 ntBASIC2.9□□□□□ -1.95
RTN3O95197 MIR181A1-201ENST00000385026 110 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AL360182.1-201ENST00000397433 468 ntBASIC2.9□□□□□ -1.95
RTN3O95197 OR9R1P-201ENST00000412200 877 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
RTN3O95197 BX276092.3-201ENST00000424182 230 ntBASIC2.9□□□□□ -1.95
RTN3O95197 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.9□□□□□ -1.95
RTN3O95197 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.9□□□□□ -1.95
RTN3O95197 MTND1P34-201ENST00000438556 671 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.9□□□□□ -1.95
RTN3O95197 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RTN3O95197 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.9□□□□□ -1.95
RTN3O95197 AP000852.1-201ENST00000472460 573 ntBASIC2.9□□□□□ -1.95
RTN3O95197 RNA5SP401-201ENST00000515920 127 ntBASIC2.9□□□□□ -1.95
RTN3O95197 RNU4-29P-201ENST00000515943 174 ntBASIC2.9□□□□□ -1.95
RTN3O95197 RNU6-835P-201ENST00000516974 104 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AC079600.2-201ENST00000550076 130 ntBASIC2.9□□□□□ -1.95
RTN3O95197 MIR4319-201ENST00000577285 85 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.9□□□□□ -1.95
RTN3O95197 AL356575.1-201ENST00000603008 283 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AL021997.1-201ENST00000605757 193 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AC096772.1-201ENST00000609146 564 ntBASIC2.9□□□□□ -1.95
RTN3O95197 AC244517.12-201ENST00000623581 663 ntBASIC2.9□□□□□ -1.95
RTN3O95197 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RTN3O95197 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RTN3O95197 RNU6-487P-201ENST00000365430 104 ntBASIC2.89□□□□□ -1.95
RTN3O95197 Y_RNA.372-201ENST00000365599 102 ntBASIC2.89□□□□□ -1.95
RTN3O95197 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.89□□□□□ -1.95
RTN3O95197 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.89□□□□□ -1.95
RTN3O95197 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.89□□□□□ -1.95
RTN3O95197 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.89□□□□□ -1.95
RTN3O95197 RPL7P43-201ENST00000478876 753 ntBASIC2.89□□□□□ -1.95
RTN3O95197 AC018437.1-201ENST00000492214 406 ntBASIC2.89□□□□□ -1.95
RTN3O95197 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.89□□□□□ -1.95
RTN3O95197 AC016957.1-201ENST00000534895 309 ntBASIC2.89□□□□□ -1.95
RTN3O95197 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.89□□□□□ -1.95
RTN3O95197 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.89□□□□□ -1.95
RTN3O95197 RPS15AP11-201ENST00000594193 385 ntBASIC2.89□□□□□ -1.95
RTN3O95197 AC025165.5-201ENST00000602802 578 ntBASIC2.89□□□□□ -1.95
RTN3O95197 AL162413.1-201ENST00000603198 110 ntBASIC2.89□□□□□ -1.95
RTN3O95197 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
RTN3O95197 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.89□□□□□ -1.95
RTN3O95197 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.89□□□□□ -1.95
RTN3O95197 RBBP8P1-201ENST00000449447 1844 ntBASIC2.89□□□□□ -1.95
RTN3O95197 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.88□□□□□ -1.95
RTN3O95197 Z75746.1-201ENST00000440243 2080 ntBASIC2.88□□□□□ -1.95
RTN3O95197 RPL9P7-201ENST00000330965 580 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC062016.1-201ENST00000355719 319 ntBASIC2.88□□□□□ -1.95
RTN3O95197 RNU6-78P-201ENST00000362897 107 ntBASIC2.88□□□□□ -1.95
RTN3O95197 RNU6-266P-201ENST00000364225 107 ntBASIC2.88□□□□□ -1.95
RTN3O95197 RNU1-112P-201ENST00000364401 164 ntBASIC2.88□□□□□ -1.95
RTN3O95197 MIR218-1-201ENST00000384999 110 ntBASIC2.88□□□□□ -1.95
RTN3O95197 RNU6-780P-201ENST00000391030 104 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AL133475.1-201ENST00000404414 305 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AL590002.1-201ENST00000406554 418 ntBASIC2.88□□□□□ -1.95
RTN3O95197 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.88□□□□□ -1.95
RTN3O95197 RNU6-648P-201ENST00000410190 107 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.88□□□□□ -1.95
RTN3O95197 AC097463.2-201ENST00000421074 142 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.88□□□□□ -1.95
RTN3O95197 NUP35P1-201ENST00000422734 947 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.88□□□□□ -1.95
RTN3O95197 SEPT14P3-201ENST00000439401 183 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AL732372.2-207ENST00000445840 183 ntBASIC2.88□□□□□ -1.95
RTN3O95197 SEPT14P2-201ENST00000453405 183 ntBASIC2.88□□□□□ -1.95
RTN3O95197 SNORD109B-201ENST00000458961 67 ntBASIC2.88□□□□□ -1.95
RTN3O95197 SNORD109A-201ENST00000459128 67 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC003982.1-202ENST00000469928 248 ntBASIC2.88□□□□□ -1.95
RTN3O95197 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.88□□□□□ -1.95
RTN3O95197 CCDC34P1-201ENST00000507441 517 ntBASIC2.88□□□□□ -1.95
RTN3O95197 TBCAP3-201ENST00000512475 312 ntBASIC2.88□□□□□ -1.95
RTN3O95197 SEPT14P4-201ENST00000513445 186 ntBASIC2.88□□□□□ -1.95
RTN3O95197 RNU6-1281P-201ENST00000516223 105 ntBASIC2.88□□□□□ -1.95
RTN3O95197 SNORA25.17-201ENST00000517184 124 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC069113.1-201ENST00000517763 267 ntBASIC2.88□□□□□ -1.95
RTN3O95197 FO082796.1-201ENST00000523795 183 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC079598.5-201ENST00000547460 117 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.88□□□□□ -1.95
RTN3O95197 ZNF519P2-201ENST00000557032 169 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.88□□□□□ -1.95
RTN3O95197 MIR3605-201ENST00000583214 100 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC104984.5-201ENST00000586878 94 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC021646.1-201ENST00000605469 484 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AC002044.1-201ENST00000606707 158 ntBASIC2.88□□□□□ -1.95
RTN3O95197 AF250324.2-201ENST00000608299 610 ntBASIC2.88□□□□□ -1.95
RTN3O95197 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTN3O95197 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTN3O95197 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RTN3O95197 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
RTN3O95197 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTN3O95197 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
RTN3O95197 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.87□□□□□ -1.95
RTN3O95197 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
RTN3O95197 RNA5SP432-201ENST00000362480 116 ntBASIC2.87□□□□□ -1.95
RTN3O95197 RNU6-859P-201ENST00000362728 107 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms