Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL136221.1-201ENST00000621449 509 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 MIR7515-201ENST00000637837 67 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.71□□□□□ -1.98
NKX2-2O95096 MTND5P27-201ENST00000428871 1720 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 MTND5P30-201ENST00000452896 1731 ntBASIC2.71□□□□□ -1.98
NKX2-2O95096 AL359854.1-201ENST00000614203 1594 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
NKX2-2O95096 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-2O95096 Y_RNA.72-201ENST00000362894 103 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 MIR450B-201ENST00000401182 78 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 RPS29P13-201ENST00000402041 169 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-2O95096 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-2O95096 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-2O95096 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC018710.1-201ENST00000506509 158 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 AC098799.2-201ENST00000509466 868 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC025423.5-201ENST00000550230 219 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.7□□□□□ -1.98
NKX2-2O95096 AC100830.2-201ENST00000581636 240 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 VN1R107P-201ENST00000601784 209 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-2O95096 CASC19-280ENST00000642102 1351 ntBASIC2.7□□□□□ -1.98
NKX2-2O95096 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.7□□□□□ -1.98
NKX2-2O95096 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-2O95096 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
NKX2-2O95096 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NKX2-2O95096 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NKX2-2O95096 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-2O95096 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-2O95096 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-2O95096 RNU1-35P-201ENST00000362782 153 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 RNU6-827P-201ENST00000365553 106 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 RNU6-128P-201ENST00000383976 107 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
NKX2-2O95096 RNA5SP390-201ENST00000410191 113 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AL513477.1-202ENST00000417061 214 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.69□□□□□ -1.98
NKX2-2O95096 RPS15AP7-201ENST00000439294 405 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 MTCO2P3-201ENST00000442543 421 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AL031274.1-201ENST00000450334 232 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-2O95096 AC092185.1-201ENST00000491371 97 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 RPL23AP49-201ENST00000492925 468 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 MTCO2P30-201ENST00000503662 364 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC083906.5-201ENST00000503722 328 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 RNA5SP341-201ENST00000516261 117 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-2O95096 CKS1BP7-201ENST00000522230 235 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.69□□□□□ -1.98
NKX2-2O95096 AC079598.5-201ENST00000547460 117 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-2O95096 MIR4325-201ENST00000583049 90 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 RPS15AP11-201ENST00000594193 385 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC019159.1-201ENST00000605094 187 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC005046.1-201ENST00000608515 625 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 DUXAP9-208ENST00000622815 614 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 AC091953.5-201ENST00000622919 233 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.69□□□□□ -1.98
NKX2-2O95096 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-2O95096 AC008264.2-201ENST00000610193 3731 ntBASIC2.69□□□□□ -1.98
NKX2-2O95096 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NKX2-2O95096 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-2O95096 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.68□□□□□ -1.98
NKX2-2O95096 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
NKX2-2O95096 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NKX2-2O95096 RNU6-336P-201ENST00000364891 107 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 SNORA51.4-201ENST00000364993 124 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 RNU6-1329P-201ENST00000365664 107 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 SNORD73A-201ENST00000386062 65 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AL451074.5-201ENST00000415894 435 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AL591043.1-201ENST00000432461 424 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC244505.4-201ENST00000434905 287 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC007969.2-201ENST00000441891 191 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 SSXP5-201ENST00000443473 287 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 Z96811.1-201ENST00000445880 108 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AC012308.1-201ENST00000451232 178 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 RN7SL283P-201ENST00000489055 303 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC018437.1-201ENST00000492214 406 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC008628.2-201ENST00000502605 298 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AC010486.1-201ENST00000511793 424 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 RN7SKP256-201ENST00000517201 314 ntBASIC2.68□□□□□ -1.98
NKX2-2O95096 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.68□□□□□ -1.98
NKX2-2O95096 AC090897.2-201ENST00000581715 130 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms