Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNU2-39P-201ENST00000410604 198 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 RNA5SP501-201ENST00000410990 112 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1BO75841 EEF1A1P40-201ENST00000412883 573 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 RPL21P90-201ENST00000415692 466 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 C1DP2-201ENST00000418167 426 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC137499.1-201ENST00000427602 88 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC000111.3-201ENST00000433478 193 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AL645568.3-201ENST00000433683 316 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AL512286.1-201ENST00000439244 400 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 MTND5P2-201ENST00000442927 1142 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
UPK1BO75841 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1BO75841 RPS29P11-201ENST00000496507 171 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 MTCO3P9-201ENST00000506989 781 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK1BO75841 RNU6-1220P-201ENST00000517126 108 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK1BO75841 GNAI2P1-201ENST00000541815 315 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC008521.1-201ENST00000587471 187 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 HMGN1P30-201ENST00000589286 268 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.43□□□□□ -2.18
UPK1BO75841 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK1BO75841 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK1BO75841 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK1BO75841 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
UPK1BO75841 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.42□□□□□ -2.18
UPK1BO75841 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK1BO75841 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.42□□□□□ -2.18
UPK1BO75841 RNU6-371P-201ENST00000364283 108 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK1BO75841 RNA5SP390-201ENST00000410191 113 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 Y_RNA.597-201ENST00000410463 100 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 MTCYBP39-201ENST00000437562 491 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 RPS24P1-201ENST00000438550 371 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 snoU13.14-201ENST00000459372 104 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 RPL30P6-201ENST00000475925 342 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.42□□□□□ -2.18
UPK1BO75841 AC117522.1-201ENST00000509821 380 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.42□□□□□ -2.18
UPK1BO75841 AC117532.1-201ENST00000514638 323 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 RNU6-991P-201ENST00000516168 107 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 RN7SKP256-201ENST00000517201 314 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1BO75841 AP001646.1-201ENST00000527936 915 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.42□□□□□ -2.18
UPK1BO75841 AC022254.1-201ENST00000567857 235 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 MIR4713-201ENST00000582691 75 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AL359999.1-201ENST00000604513 294 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC026790.2-201ENST00000606282 430 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC026585.1-201ENST00000619582 524 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK1BO75841 MIR1248-201ENST00000629190 106 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 MIR219B-201ENST00000637023 88 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 AC006927.3-201ENST00000638789 384 ntBASIC1.42□□□□□ -2.18
UPK1BO75841 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.42□□□□□ -2.18
UPK1BO75841 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
UPK1BO75841 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
UPK1BO75841 ZNF355P-201ENST00000427301 3216 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.41□□□□□ -2.18
UPK1BO75841 Y_RNA.22-201ENST00000362492 102 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 RNU5F-7P-201ENST00000363696 115 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 SNORA67.3-201ENST00000384366 140 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 SNORA64-201ENST00000384674 134 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 MIR558-201ENST00000384920 94 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
UPK1BO75841 MIR1294-201ENST00000408503 142 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 RNU6-584P-201ENST00000410350 95 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 USP9YP18-201ENST00000425912 695 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK1BO75841 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1BO75841 EPS15P1-201ENST00000448836 336 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AC245102.2-201ENST00000448956 180 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1BO75841 ZNF114P1-201ENST00000453500 292 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AL122001.1-201ENST00000457027 370 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 MTCO2P29-201ENST00000465212 189 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AC126389.1-201ENST00000477436 290 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 MTND2P7-201ENST00000521337 640 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AP003461.1-201ENST00000528866 78 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AP002453.2-201ENST00000533503 320 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AL356057.1-201ENST00000533798 831 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
UPK1BO75841 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
UPK1BO75841 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
UPK1BO75841 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.41□□□□□ -2.18
UPK1BO75841 AL022345.1-201ENST00000607292 135 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AC103810.8-201ENST00000607347 118 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
UPK1BO75841 AC091834.1-201ENST00000614543 472 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AC007792.1-201ENST00000623023 402 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AL359740.1-201ENST00000624340 592 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AC019226.2-201ENST00000625973 424 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 AC245060.5-201ENST00000610778 3293 ntBASIC1.41□□□□□ -2.18
UPK1BO75841 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
UPK1BO75841 RNU6-500P-201ENST00000362349 107 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 RNU1-58P-201ENST00000362413 163 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 RNU6-61P-201ENST00000365528 109 ntBASIC1.4□□□□□ -2.19
UPK1BO75841 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 194.7 ms