Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 MIR6128-201ENST00000615528 109 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC007485.1-201ENST00000616755 206 ntBASIC2.89□□□□□ -1.95
LDB3O75112 AC092608.2-201ENST00000624427 218 ntBASIC2.89□□□□□ -1.95
LDB3O75112 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LDB3O75112 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LDB3O75112 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.88□□□□□ -1.95
LDB3O75112 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDB3O75112 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB3O75112 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB3O75112 RNU6-562P-201ENST00000362731 107 ntBASIC2.88□□□□□ -1.95
LDB3O75112 Y_RNA.112-201ENST00000363250 102 ntBASIC2.88□□□□□ -1.95
LDB3O75112 RNU6-1309P-201ENST00000363305 108 ntBASIC2.88□□□□□ -1.95
LDB3O75112 Y_RNA.496-201ENST00000384444 101 ntBASIC2.88□□□□□ -1.95
LDB3O75112 RNU6-1035P-201ENST00000384477 107 ntBASIC2.88□□□□□ -1.95
LDB3O75112 RNU6-95P-201ENST00000384697 107 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AL360182.1-201ENST00000397433 468 ntBASIC2.88□□□□□ -1.95
LDB3O75112 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.88□□□□□ -1.95
LDB3O75112 AL139396.1-201ENST00000421137 167 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.88□□□□□ -1.95
LDB3O75112 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB3O75112 RPL21P40-201ENST00000428586 483 ntBASIC2.88□□□□□ -1.95
LDB3O75112 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB3O75112 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.88□□□□□ -1.95
LDB3O75112 CECR9-201ENST00000453421 199 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AC010099.1-201ENST00000455434 375 ntBASIC2.88□□□□□ -1.95
LDB3O75112 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB3O75112 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.88□□□□□ -1.95
LDB3O75112 SNORA70.24-201ENST00000517233 118 ntBASIC2.88□□□□□ -1.95
LDB3O75112 RN7SKP295-201ENST00000517264 153 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AC245166.1-201ENST00000521012 253 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AP003122.3-201ENST00000526316 255 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AC084851.1-201ENST00000529105 249 ntBASIC2.88□□□□□ -1.95
LDB3O75112 MIR548AC-201ENST00000585049 88 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AC002044.1-201ENST00000606707 158 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AC009229.3-201ENST00000608056 282 ntBASIC2.88□□□□□ -1.95
LDB3O75112 U2.17-201ENST00000611454 95 ntBASIC2.88□□□□□ -1.95
LDB3O75112 AC010205.1-201ENST00000616668 449 ntBASIC2.88□□□□□ -1.95
LDB3O75112 MIR622-201ENST00000638396 96 ntBASIC2.88□□□□□ -1.95
LDB3O75112 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.88□□□□□ -1.95
LDB3O75112 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LDB3O75112 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LDB3O75112 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
LDB3O75112 ZNF826P-207ENST00000622273 1910 ntBASIC2.87□□□□□ -1.95
LDB3O75112 GABRG2-229ENST00000641017 3628 ntBASIC2.87□□□□□ -1.95
LDB3O75112 MTND5P10-201ENST00000603719 1809 ntBASIC2.87□□□□□ -1.95
LDB3O75112 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LDB3O75112 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RNU6-1059P-201ENST00000363752 98 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RNU6-1040P-201ENST00000383974 107 ntBASIC2.87□□□□□ -1.95
LDB3O75112 Y_RNA.422-201ENST00000384054 114 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RNU6-639P-201ENST00000384074 107 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RNU6-140P-201ENST00000384566 108 ntBASIC2.87□□□□□ -1.95
LDB3O75112 MIR578-201ENST00000384828 96 ntBASIC2.87□□□□□ -1.95
LDB3O75112 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.87□□□□□ -1.95
LDB3O75112 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.87□□□□□ -1.95
LDB3O75112 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 IPO7P1-201ENST00000442031 636 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RPS3AP12-201ENST00000443616 753 ntBASIC2.87□□□□□ -1.95
LDB3O75112 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 AL031183.1-201ENST00000457667 207 ntBASIC2.87□□□□□ -1.95
LDB3O75112 MTATP8P1-201ENST00000467115 207 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RN7SL20P-201ENST00000488827 297 ntBASIC2.87□□□□□ -1.95
LDB3O75112 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 AC079140.5-201ENST00000507882 310 ntBASIC2.87□□□□□ -1.95
LDB3O75112 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 RN7SKP272-201ENST00000516988 232 ntBASIC2.87□□□□□ -1.95
LDB3O75112 RNU6-323P-201ENST00000521915 107 ntBASIC2.87□□□□□ -1.95
LDB3O75112 IGHV3-76-201ENST00000522465 295 ntBASIC2.87□□□□□ -1.95
LDB3O75112 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.87□□□□□ -1.95
LDB3O75112 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.87□□□□□ -1.95
LDB3O75112 AL157871.3-201ENST00000557231 293 ntBASIC2.87□□□□□ -1.95
LDB3O75112 MIR4680-201ENST00000580906 66 ntBASIC2.87□□□□□ -1.95
LDB3O75112 MIR3941-201ENST00000582572 103 ntBASIC2.87□□□□□ -1.95
LDB3O75112 AL161756.2-201ENST00000604597 246 ntBASIC2.87□□□□□ -1.95
LDB3O75112 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.87□□□□□ -1.95
LDB3O75112 AC091925.1-201ENST00000623204 462 ntBASIC2.87□□□□□ -1.95
LDB3O75112 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
LDB3O75112 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.86□□□□□ -1.95
LDB3O75112 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LDB3O75112 Y_RNA.33-201ENST00000362591 102 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU6-270P-201ENST00000364131 105 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU6-395P-201ENST00000365662 106 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU6-217P-201ENST00000384164 104 ntBASIC2.86□□□□□ -1.95
LDB3O75112 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU6-45P-201ENST00000384471 107 ntBASIC2.86□□□□□ -1.95
LDB3O75112 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LDB3O75112 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LDB3O75112 Y_RNA.594-201ENST00000410373 140 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU2-68P-201ENST00000410878 191 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB3O75112 RPL21P90-201ENST00000415692 466 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB3O75112 AC018865.2-201ENST00000423631 129 ntBASIC2.86□□□□□ -1.95
LDB3O75112 SNRPEP9-201ENST00000436794 238 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB3O75112 AL360271.2-201ENST00000447710 161 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms