Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 RNU6-457P-201ENST00000363999 107 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 RNU6-622P-201ENST00000384272 103 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 RNU6-160P-201ENST00000384591 107 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.28□□□□□ -2.2
SCN2BO60939 ELOCP17-201ENST00000414751 326 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN2BO60939 ELOCP9-201ENST00000418624 239 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AL590556.1-201ENST00000423231 483 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AL365400.1-201ENST00000431854 640 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC006026.2-201ENST00000457376 180 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 MTCYBP18-201ENST00000501056 747 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 HMGN1P13-201ENST00000505795 138 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.28□□□□□ -2.2
SCN2BO60939 RNA5SP445-201ENST00000515889 115 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 RNU6-902P-201ENST00000517212 91 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 COPS8P3-201ENST00000526024 482 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.28□□□□□ -2.2
SCN2BO60939 DNAJC19P9-201ENST00000555084 351 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC025678.1-201ENST00000567861 338 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 MIR4303-201ENST00000581299 66 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 MIR4298-201ENST00000584380 73 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC104984.5-201ENST00000586878 94 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 AC007792.1-201ENST00000623023 402 ntBASIC1.28□□□□□ -2.2
SCN2BO60939 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SCN2BO60939 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.27□□□□□ -2.21
SCN2BO60939 Y_RNA.110-201ENST00000363220 99 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 RNU6-414P-201ENST00000363705 104 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN2BO60939 AL121601.2-201ENST00000438019 707 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN2BO60939 AC079448.1-201ENST00000449377 373 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 RNVU1-2-201ENST00000516326 135 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.27□□□□□ -2.21
SCN2BO60939 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 AC137800.2-201ENST00000574375 120 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.27□□□□□ -2.21
SCN2BO60939 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.27□□□□□ -2.21
SCN2BO60939 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.27□□□□□ -2.21
SCN2BO60939 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SCN2BO60939 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SCN2BO60939 AC092104.1-201ENST00000497346 1441 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 ZNF209P-201ENST00000593450 2304 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 RNA5SP99-201ENST00000364020 114 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 RNU6-944P-201ENST00000364023 107 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 RNU6-439P-201ENST00000384188 106 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 RNU2-62P-201ENST00000410868 191 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AL365338.1-201ENST00000422282 858 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN2BO60939 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN2BO60939 AP000949.1-201ENST00000438328 629 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN2BO60939 AL583843.1-201ENST00000456070 346 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AC098862.1-201ENST00000504991 413 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.26□□□□□ -2.21
SCN2BO60939 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.26□□□□□ -2.21
SCN2BO60939 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.26□□□□□ -2.21
SCN2BO60939 KC877982.1-201ENST00000602313 470 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AC068620.3-201ENST00000602749 560 ntBASIC1.26□□□□□ -2.21
SCN2BO60939 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN2BO60939 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.26□□□□□ -2.21
SCN2BO60939 RNU6-942P-201ENST00000363002 107 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 RNU6-203P-201ENST00000384038 104 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 MIR1267-201ENST00000408723 78 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 TIMM9P1-201ENST00000436122 256 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN2BO60939 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN2BO60939 RPL23AP35-201ENST00000451906 501 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AC087477.1-201ENST00000465747 340 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 RPL30P6-201ENST00000475925 342 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.25□□□□□ -2.21
SCN2BO60939 SNORA31.17-201ENST00000516953 127 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN2BO60939 AP003034.1-201ENST00000534621 422 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 SUB1P4-201ENST00000566062 339 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 MTCYBP33-201ENST00000575007 1130 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AC005786.1-201ENST00000588553 154 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 VN1R82P-201ENST00000601481 356 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AL355802.3-201ENST00000607571 545 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 AL121890.5-201ENST00000620848 304 ntBASIC1.25□□□□□ -2.21
SCN2BO60939 RNU6-190P-201ENST00000384154 102 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 snoU109.2-201ENST00000459316 135 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.24□□□□□ -2.21
SCN2BO60939 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN2BO60939 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN2BO60939 RNU6-991P-201ENST00000516168 107 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 AL161670.1-201ENST00000554348 137 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN2BO60939 AC023813.2-201ENST00000564321 469 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.24□□□□□ -2.21
SCN2BO60939 MIR4524B-201ENST00000581569 115 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 AC072039.2-201ENST00000608883 439 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
SCN2BO60939 AC130324.3-201ENST00000614165 542 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms