Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 U2.1-201ENST00000618978 145 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 AL691447.3-201ENST00000635020 330 ntBASIC4.42□□□□□ -1.7
GRIN3BO60391 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.42□□□□□ -1.7
GRIN3BO60391 RNU6-166P-201ENST00000384371 107 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 Y_RNA.526-201ENST00000384572 110 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 Y_RNA.552-201ENST00000384665 112 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 MIR34A-201ENST00000385130 110 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.41□□□□□ -1.7
GRIN3BO60391 PGBD4P6-201ENST00000421501 610 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 PIGFP3-201ENST00000441918 722 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 OSTCP8-201ENST00000445117 448 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 AC009237.8-201ENST00000445492 379 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.41□□□□□ -1.7
GRIN3BO60391 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.41□□□□□ -1.7
GRIN3BO60391 Y_RNA.638-201ENST00000459374 113 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 GZMAP1-201ENST00000503054 631 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 RAC1P2-201ENST00000511164 579 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 RNU6-911P-201ENST00000516523 104 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 SNORA31.19-201ENST00000517079 126 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 AC144568.1-201ENST00000520139 137 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.41□□□□□ -1.7
GRIN3BO60391 AC040926.1-201ENST00000530195 238 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.41□□□□□ -1.7
GRIN3BO60391 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.41□□□□□ -1.7
GRIN3BO60391 VN1R91P-201ENST00000594377 169 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 AL161629.2-201ENST00000615347 275 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 AL137790.1-201ENST00000634283 177 ntBASIC4.41□□□□□ -1.7
GRIN3BO60391 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
GRIN3BO60391 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.41□□□□□ -1.7
GRIN3BO60391 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GRIN3BO60391 AC007785.2-201ENST00000598627 1916 ntBASIC4.4□□□□□ -1.7
GRIN3BO60391 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GRIN3BO60391 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GRIN3BO60391 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
GRIN3BO60391 RNU6-774P-201ENST00000363238 107 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 Y_RNA.117-201ENST00000363294 101 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 Y_RNA.291-201ENST00000364886 113 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 RNU6-472P-201ENST00000384299 107 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 Y_RNA.533-201ENST00000384596 114 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 RNU4-47P-201ENST00000410876 114 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIN3BO60391 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIN3BO60391 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 Z82210.1-201ENST00000440037 231 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIN3BO60391 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GRIN3BO60391 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.4□□□□□ -1.71
GRIN3BO60391 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.4□□□□□ -1.71
GRIN3BO60391 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.4□□□□□ -1.71
GRIN3BO60391 RNU6-408P-201ENST00000515910 100 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 RNA5SP165-201ENST00000517142 115 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 RNU6-1073P-201ENST00000517182 106 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 AC004584.2-201ENST00000570407 410 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.4□□□□□ -1.71
GRIN3BO60391 HMGB1P50-201ENST00000605814 607 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 AC098479.1-201ENST00000609225 154 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 AC006023.2-201ENST00000609916 167 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.4□□□□□ -1.71
GRIN3BO60391 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GRIN3BO60391 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.4□□□□□ -1.71
GRIN3BO60391 SCN1A-220ENST00000641603 12506 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 Z83843.1-201ENST00000604070 3685 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.4□□□□□ -1.71
GRIN3BO60391 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GRIN3BO60391 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
GRIN3BO60391 MTND5P9-201ENST00000503854 1755 ntBASIC4.4□□□□□ -1.71
GRIN3BO60391 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.4□□□□□ -1.71
GRIN3BO60391 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GRIN3BO60391 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GRIN3BO60391 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
GRIN3BO60391 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GRIN3BO60391 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GRIN3BO60391 RNU6-595P-201ENST00000363944 107 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 SNORA44-201ENST00000384584 132 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 RNU2-68P-201ENST00000410878 191 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 RPS6P12-201ENST00000432491 726 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 AL121890.1-201ENST00000435457 205 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 SETP5-201ENST00000437270 562 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 AL078601.1-201ENST00000444542 271 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 Z75741.1-201ENST00000446793 314 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.39□□□□□ -1.71
GRIN3BO60391 ANP32BP2-201ENST00000454525 545 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 U3.44-201ENST00000458938 192 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 AC023157.2-201ENST00000540596 141 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 MIR3162-201ENST00000581818 82 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.39□□□□□ -1.71
GRIN3BO60391 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 MTND5P7-201ENST00000413558 1798 ntBASIC4.39□□□□□ -1.71
GRIN3BO60391 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GRIN3BO60391 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
GRIN3BO60391 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GRIN3BO60391 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GRIN3BO60391 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.38□□□□□ -1.71
GRIN3BO60391 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
GRIN3BO60391 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GRIN3BO60391 RNU6-874P-201ENST00000362390 105 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 Y_RNA.210-201ENST00000364161 110 ntBASIC4.38□□□□□ -1.71
GRIN3BO60391 Y_RNA.551-201ENST00000384661 102 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms