Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RNU6-946P-201ENST00000383878 107 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 RNU6-298P-201ENST00000390888 96 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 RNA5SP390-201ENST00000410191 113 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.04□□□□□ -2.24
SSNA1O43805 MTCYBP5-201ENST00000423752 1135 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 TXNL1P1-201ENST00000429528 554 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AL627311.1-201ENST00000431514 115 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.04□□□□□ -2.24
SSNA1O43805 AC027119.1-201ENST00000440877 241 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 RNU1-123P-201ENST00000458950 160 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 RPL30P7-201ENST00000479312 323 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 RPL26P26-201ENST00000480251 434 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AL049873.1-201ENST00000480540 376 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AL133373.1-201ENST00000497098 94 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 MTCYBP18-201ENST00000501056 747 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 HMGN1P13-201ENST00000505795 138 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.04□□□□□ -2.24
SSNA1O43805 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.04□□□□□ -2.24
SSNA1O43805 RRN3P3-201ENST00000549207 578 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AC090115.3-201ENST00000553218 849 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 KC877982.1-201ENST00000602313 470 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AL022154.1-201ENST00000604698 785 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AC245060.5-201ENST00000610778 3293 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.03□□□□□ -2.24
SSNA1O43805 RPL21P111-201ENST00000418453 477 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.03□□□□□ -2.24
SSNA1O43805 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.03□□□□□ -2.24
SSNA1O43805 AC092648.1-201ENST00000425870 423 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.03□□□□□ -2.24
SSNA1O43805 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
SSNA1O43805 UBE2V1P8-201ENST00000437166 265 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.03□□□□□ -2.24
SSNA1O43805 JTBP1-201ENST00000441314 247 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.03□□□□□ -2.24
SSNA1O43805 AC108078.1-201ENST00000508073 725 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC112198.4-201ENST00000515450 351 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 Y_RNA.687-201ENST00000516558 91 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 RNU6-1092P-201ENST00000516955 87 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AP003033.1-201ENST00000527244 415 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.03□□□□□ -2.24
SSNA1O43805 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.03□□□□□ -2.24
SSNA1O43805 AC068620.3-201ENST00000602749 560 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC091965.4-201ENST00000607691 587 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AL391813.2-201ENST00000609113 322 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC006386.1-201ENST00000619436 415 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 AC007792.1-201ENST00000623023 402 ntBASIC1.03□□□□□ -2.24
SSNA1O43805 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.03□□□□□ -2.24
SSNA1O43805 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
SSNA1O43805 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.02□□□□□ -2.25
SSNA1O43805 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 RNU6-511P-201ENST00000363496 107 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 RNU4-13P-201ENST00000364019 141 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 SNORA25.8-201ENST00000364831 128 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 SNORD116-12-201ENST00000384468 92 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 MIR618-201ENST00000385287 98 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AL136310.1-201ENST00000404926 654 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 SNORA3.2-201ENST00000408221 125 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.02□□□□□ -2.25
SSNA1O43805 AC139712.2-201ENST00000424302 339 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AL589872.1-201ENST00000426602 288 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 MTND5P25-201ENST00000430499 799 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 KATNBL1P3-201ENST00000443475 909 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 GDI2P2-201ENST00000445131 608 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.02□□□□□ -2.25
SSNA1O43805 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.02□□□□□ -2.25
SSNA1O43805 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.02□□□□□ -2.25
SSNA1O43805 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.02□□□□□ -2.25
SSNA1O43805 AC112206.3-201ENST00000514578 389 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 Y_RNA.689-201ENST00000516589 107 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.02□□□□□ -2.25
SSNA1O43805 AC100821.1-201ENST00000523153 2479 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AC013828.2-201ENST00000532487 235 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AP000654.2-201ENST00000605633 586 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AL021368.1-201ENST00000607490 540 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AC108747.1-201ENST00000609508 535 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AC084824.5-201ENST00000612009 413 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 RNU6-1192P-201ENST00000612197 107 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 RNU6-489P-201ENST00000618289 107 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 AC095038.3-201ENST00000634439 195 ntBASIC1.02□□□□□ -2.25
SSNA1O43805 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.02□□□□□ -2.25
SSNA1O43805 AC002543.1-201ENST00000299783 1954 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 LINC02555-201ENST00000563933 1951 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SSNA1O43805 SNORD56.1-201ENST00000362913 68 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 RNU6-60P-201ENST00000364792 103 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 RNU5E-6P-201ENST00000365574 115 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 MIR23B-201ENST00000384832 97 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AL591704.2-201ENST00000421658 181 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AL365400.1-201ENST00000431854 640 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.01□□□□□ -2.25
SSNA1O43805 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.01□□□□□ -2.25
SSNA1O43805 USP9YP17-201ENST00000444617 696 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.01□□□□□ -2.25
SSNA1O43805 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.01□□□□□ -2.25
SSNA1O43805 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.01□□□□□ -2.25
SSNA1O43805 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.01□□□□□ -2.25
SSNA1O43805 AC079140.2-201ENST00000506193 142 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
SSNA1O43805 AC116353.3-201ENST00000511215 249 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms