Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PROM1O43490 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PROM1O43490 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PROM1O43490 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PROM1O43490 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PROM1O43490 AC008568.2-201ENST00000623862 2313 ntBASIC3.38□□□□□ -1.87
PROM1O43490 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PROM1O43490 AC005592.1-201ENST00000566527 1640 ntBASIC3.38□□□□□ -1.87
PROM1O43490 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.38□□□□□ -1.87
PROM1O43490 RNU6-384P-201ENST00000364900 104 ntBASIC3.38□□□□□ -1.87
PROM1O43490 Y_RNA.314-201ENST00000365114 102 ntBASIC3.38□□□□□ -1.87
PROM1O43490 SNORA41-201ENST00000384675 132 ntBASIC3.38□□□□□ -1.87
PROM1O43490 Y_RNA.557-201ENST00000384680 107 ntBASIC3.38□□□□□ -1.87
PROM1O43490 MIR10A-201ENST00000385043 110 ntBASIC3.38□□□□□ -1.87
PROM1O43490 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PROM1O43490 EI24P2-201ENST00000397776 1076 ntBASIC3.38□□□□□ -1.87
PROM1O43490 RNA5SP38-201ENST00000410750 119 ntBASIC3.38□□□□□ -1.87
PROM1O43490 Y_RNA.623-201ENST00000411128 95 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AP000907.1-201ENST00000428428 510 ntBASIC3.38□□□□□ -1.87
PROM1O43490 DAP3P1-201ENST00000441522 278 ntBASIC3.38□□□□□ -1.87
PROM1O43490 IPO7P1-201ENST00000442031 636 ntBASIC3.38□□□□□ -1.87
PROM1O43490 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.38□□□□□ -1.87
PROM1O43490 AC128713.1-201ENST00000471495 306 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AC084357.1-201ENST00000473404 255 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AC139453.3-201ENST00000493276 369 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.38□□□□□ -1.87
PROM1O43490 RNA5SP165-201ENST00000517142 115 ntBASIC3.38□□□□□ -1.87
PROM1O43490 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PROM1O43490 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.38□□□□□ -1.87
PROM1O43490 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.38□□□□□ -1.87
PROM1O43490 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.38□□□□□ -1.87
PROM1O43490 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.38□□□□□ -1.87
PROM1O43490 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.38□□□□□ -1.87
PROM1O43490 AC010205.1-201ENST00000616668 449 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AC087588.2-201ENST00000617667 426 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AP003355.3-201ENST00000623465 114 ntBASIC3.38□□□□□ -1.87
PROM1O43490 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.38□□□□□ -1.87
PROM1O43490 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
PROM1O43490 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PROM1O43490 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PROM1O43490 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PROM1O43490 MFSD8-233ENST00000641482 4860 ntBASIC3.38□□□□□ -1.87
PROM1O43490 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PROM1O43490 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
PROM1O43490 SNORD14B-201ENST00000364533 90 ntBASIC3.37□□□□□ -1.87
PROM1O43490 SNORA14A-201ENST00000364773 135 ntBASIC3.37□□□□□ -1.87
PROM1O43490 Y_RNA.389-201ENST00000383924 113 ntBASIC3.37□□□□□ -1.87
PROM1O43490 RNVU1-14-201ENST00000384770 164 ntBASIC3.37□□□□□ -1.87
PROM1O43490 AL513475.1-201ENST00000406602 315 ntBASIC3.37□□□□□ -1.87
PROM1O43490 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PROM1O43490 AL096701.2-201ENST00000416920 238 ntBASIC3.37□□□□□ -1.87
PROM1O43490 MRPS18CP6-201ENST00000423587 223 ntBASIC3.37□□□□□ -1.87
PROM1O43490 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.37□□□□□ -1.87
PROM1O43490 MYL8P-204ENST00000431574 518 ntBASIC3.37□□□□□ -1.87
PROM1O43490 RPS15AP10-201ENST00000432472 382 ntBASIC3.37□□□□□ -1.87
PROM1O43490 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.37□□□□□ -1.87
PROM1O43490 AC099799.1-201ENST00000439809 192 ntBASIC3.37□□□□□ -1.87
PROM1O43490 AC011816.1-201ENST00000441346 546 ntBASIC3.37□□□□□ -1.87
PROM1O43490 AC009237.8-201ENST00000445492 379 ntBASIC3.37□□□□□ -1.87
PROM1O43490 RNU6-1037P-201ENST00000459571 107 ntBASIC3.37□□□□□ -1.87
PROM1O43490 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.37□□□□□ -1.87
PROM1O43490 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.37□□□□□ -1.87
PROM1O43490 AC105758.1-201ENST00000506038 399 ntBASIC3.37□□□□□ -1.87
PROM1O43490 RNU2-27P-201ENST00000516185 142 ntBASIC3.37□□□□□ -1.87
PROM1O43490 SNORA31.19-201ENST00000517079 126 ntBASIC3.37□□□□□ -1.87
PROM1O43490 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PROM1O43490 MIR4298-201ENST00000584380 73 ntBASIC3.37□□□□□ -1.87
PROM1O43490 MIR7975-201ENST00000619350 68 ntBASIC3.37□□□□□ -1.87
PROM1O43490 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.37□□□□□ -1.87
PROM1O43490 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PROM1O43490 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PROM1O43490 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.36□□□□□ -1.87
PROM1O43490 Y_RNA.80-201ENST00000362996 102 ntBASIC3.36□□□□□ -1.87
PROM1O43490 Y_RNA.149-201ENST00000363558 117 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RNU6-1317P-201ENST00000364582 104 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RNU1-115P-201ENST00000365329 160 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RNU6-827P-201ENST00000365553 106 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PROM1O43490 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.36□□□□□ -1.87
PROM1O43490 Y_RNA.455-201ENST00000384230 98 ntBASIC3.36□□□□□ -1.87
PROM1O43490 Y_RNA.485-201ENST00000384395 102 ntBASIC3.36□□□□□ -1.87
PROM1O43490 MIR325-201ENST00000385260 98 ntBASIC3.36□□□□□ -1.87
PROM1O43490 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RNU2-68P-201ENST00000410878 191 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.36□□□□□ -1.87
PROM1O43490 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.36□□□□□ -1.87
PROM1O43490 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.36□□□□□ -1.87
PROM1O43490 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AL627311.1-201ENST00000431514 115 ntBASIC3.36□□□□□ -1.87
PROM1O43490 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.36□□□□□ -1.87
PROM1O43490 NDUFB4P6-201ENST00000436819 366 ntBASIC3.36□□□□□ -1.87
PROM1O43490 FO393415.2-201ENST00000480085 343 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AC106707.2-201ENST00000484182 374 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RPL21P13-201ENST00000488305 481 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RN7SKP18-201ENST00000516005 275 ntBASIC3.36□□□□□ -1.87
PROM1O43490 RNU6-572P-201ENST00000516724 80 ntBASIC3.36□□□□□ -1.87
PROM1O43490 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
PROM1O43490 GNAI2P1-201ENST00000541815 315 ntBASIC3.36□□□□□ -1.87
PROM1O43490 HSBP1P1-201ENST00000555205 166 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms