Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-1023P-201ENST00000516137 106 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.12□□□□□ -1.75
SRGAP3O43295 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.12□□□□□ -1.75
SRGAP3O43295 AMZ2P1-203ENST00000565833 850 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AC107294.1-201ENST00000609524 467 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AC006023.2-201ENST00000609916 167 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AC130454.1-201ENST00000622948 401 ntBASIC4.12□□□□□ -1.75
SRGAP3O43295 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.12□□□□□ -1.75
SRGAP3O43295 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SRGAP3O43295 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SRGAP3O43295 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SRGAP3O43295 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.11□□□□□ -1.75
SRGAP3O43295 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.11□□□□□ -1.75
SRGAP3O43295 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SRGAP3O43295 RNU6-770P-201ENST00000363929 105 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 MIR301A-201ENST00000385261 86 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 PTMAP5-201ENST00000393073 333 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 RNA5SP120-201ENST00000410900 112 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 AC092573.2-201ENST00000434546 243 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 RPL23AP14-201ENST00000468281 468 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 MTND1P19-201ENST00000511780 315 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.11□□□□□ -1.75
SRGAP3O43295 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.11□□□□□ -1.75
SRGAP3O43295 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.11□□□□□ -1.75
SRGAP3O43295 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.11□□□□□ -1.75
SRGAP3O43295 MIR4425-201ENST00000580572 84 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 AC098826.3-201ENST00000603823 466 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 AC007179.3-201ENST00000604976 235 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 RMST_4.1-201ENST00000616886 107 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 AL159153.1-201ENST00000619688 317 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 OR4G2P-202ENST00000641004 1759 ntBASIC4.11□□□□□ -1.75
SRGAP3O43295 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SRGAP3O43295 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SRGAP3O43295 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SRGAP3O43295 MTND5P6-201ENST00000422338 1798 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SRGAP3O43295 RPL9P7-201ENST00000330965 580 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 Y_RNA.33-201ENST00000362591 102 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-37P-201ENST00000362692 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-11P-201ENST00000364234 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-7-201ENST00000364784 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 U8.8-201ENST00000365399 135 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-8-201ENST00000365467 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-395P-201ENST00000365662 106 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-25P-201ENST00000383873 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-1-201ENST00000383898 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-48P-201ENST00000384161 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-36P-201ENST00000384172 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-4P-201ENST00000384205 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-5P-201ENST00000384238 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 Y_RNA.471-201ENST00000384312 102 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-3P-201ENST00000384314 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-16P-201ENST00000384385 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-15P-201ENST00000384534 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-2-201ENST00000384627 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-29P-201ENST00000384637 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-9-201ENST00000384776 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-33P-201ENST00000384793 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SRGAP3O43295 SAR1AP2-201ENST00000392696 594 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 AL591034.2-201ENST00000402839 359 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU2-64P-201ENST00000411315 191 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 AC007098.1-201ENST00000420122 367 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 AL513043.1-201ENST00000439124 535 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 Z75741.1-201ENST00000446793 314 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.1□□□□□ -1.75
SRGAP3O43295 IFNWP4-201ENST00000453148 294 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 MTND4LP30-201ENST00000454092 297 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-1037P-201ENST00000459571 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RPL9P9-202ENST00000466501 579 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 HMGB3P17-201ENST00000504195 649 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 Y_RNA.673-201ENST00000516306 88 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-897P-201ENST00000517135 105 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.1□□□□□ -1.75
SRGAP3O43295 TRAV37-201ENST00000553906 342 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 MIR1273C-201ENST00000578669 77 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.1□□□□□ -1.75
SRGAP3O43295 AL512605.2-201ENST00000592972 256 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 AC009314.1-201ENST00000603871 304 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 RNU6-6P-201ENST00000606623 107 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 uc_338.1-201ENST00000612113 180 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.1□□□□□ -1.75
SRGAP3O43295 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.1□□□□□ -1.75
SRGAP3O43295 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.1□□□□□ -1.75
SRGAP3O43295 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.1□□□□□ -1.75
SRGAP3O43295 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.1□□□□□ -1.75
SRGAP3O43295 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SRGAP3O43295 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.1□□□□□ -1.75
SRGAP3O43295 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
SRGAP3O43295 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.09□□□□□ -1.75
SRGAP3O43295 RNU6-1167P-201ENST00000363227 94 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 SNORA70.4-201ENST00000365509 134 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SRGAP3O43295 RNU6-700P-201ENST00000391043 107 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 U3.42-201ENST00000408746 214 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 RNU6-1025P-201ENST00000410629 104 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 MTCO3P19-201ENST00000415864 321 ntBASIC4.09□□□□□ -1.75
SRGAP3O43295 MTND5P15-201ENST00000434246 349 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms