Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNORA59A-201ENST00000459326 152 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC128713.1-201ENST00000471495 306 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC093663.1-201ENST00000497190 394 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM38O00635 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.42□□□□□ -1.86
TRIM38O00635 RN7SKP24-201ENST00000515888 284 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 RNU1-103P-201ENST00000516502 125 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 IGKV2-26-201ENST00000518305 343 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AP005902.1-201ENST00000521358 186 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM38O00635 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM38O00635 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM38O00635 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 MYL12BP1-201ENST00000569826 507 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM38O00635 MIR3941-201ENST00000582572 103 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 AC103988.1-201ENST00000566382 2177 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM38O00635 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.41□□□□□ -1.86
TRIM38O00635 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM38O00635 AC008669.1-201ENST00000565823 2178 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-1252P-201ENST00000363054 104 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-371P-201ENST00000364283 108 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-805P-201ENST00000365643 106 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 Y_RNA.378-201ENST00000365652 113 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-1013P-201ENST00000384180 107 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-1127P-201ENST00000384580 107 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 U3.19-201ENST00000390893 196 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM38O00635 AL139039.1-201ENST00000401900 692 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC096664.2-201ENST00000411843 406 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM38O00635 FABP5P14-201ENST00000437273 393 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM38O00635 AL078601.1-201ENST00000444542 271 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AL357552.1-201ENST00000445254 415 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AL360271.2-201ENST00000447710 161 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM38O00635 AL031183.1-201ENST00000457667 207 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM38O00635 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM38O00635 RPL7P43-201ENST00000478876 753 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC139453.3-201ENST00000493276 369 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RPS27AP10-201ENST00000496103 208 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 TRBVA-201ENST00000498804 316 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM38O00635 AC079140.5-201ENST00000507882 310 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-566P-201ENST00000516790 107 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-388P-201ENST00000517012 105 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-389P-201ENST00000517048 105 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 RNU6-1213P-201ENST00000517075 94 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.41□□□□□ -1.86
TRIM38O00635 AC025755.1-201ENST00000521306 278 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM38O00635 IMMP1LP2-201ENST00000552954 492 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 MTCO3P23-201ENST00000561363 289 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC010653.1-201ENST00000571108 881 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC012493.2-201ENST00000595083 291 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AL161629.2-201ENST00000615347 275 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 uc_338.34-201ENST00000617467 174 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM38O00635 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM38O00635 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM38O00635 AC110491.1-201ENST00000562191 2010 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 AC091564.4-201ENST00000533934 2194 ntBASIC3.41□□□□□ -1.86
TRIM38O00635 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM38O00635 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM38O00635 Y_RNA.176-201ENST00000363815 109 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 RNU6-715P-201ENST00000365204 103 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 Y_RNA.399-201ENST00000383955 105 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 RNU6-310P-201ENST00000384655 107 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM38O00635 RNA5SP293-201ENST00000410527 113 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM38O00635 AC098831.1-201ENST00000440661 216 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM38O00635 HMGN1P18-201ENST00000457642 277 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AC022493.1-201ENST00000492984 337 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM38O00635 AC009901.1-201ENST00000506703 541 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 RNU6-976P-201ENST00000516086 111 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 SNORA70.19-201ENST00000516717 90 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 RNU6-572P-201ENST00000516724 80 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 SNORA31.19-201ENST00000517079 126 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AP002404.1-201ENST00000532005 451 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 MIR4790-201ENST00000577799 79 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 MIR5583-1-201ENST00000580941 59 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AL645944.1-201ENST00000603857 493 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AC099778.2-201ENST00000610904 211 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AL157817.1-201ENST00000614264 790 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 AL162373.1-201ENST00000620433 407 ntBASIC3.4□□□□□ -1.87
TRIM38O00635 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms