Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX1O00570 AL359854.1-201ENST00000614203 1594 ntBASIC4.35□□□□□ -1.71
SOX1O00570 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX1O00570 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SOX1O00570 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SOX1O00570 AC008568.2-201ENST00000623862 2313 ntBASIC4.34□□□□□ -1.71
SOX1O00570 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SOX1O00570 Y_RNA.275-201ENST00000364726 110 ntBASIC4.34□□□□□ -1.71
SOX1O00570 RNU6-541P-201ENST00000384709 110 ntBASIC4.34□□□□□ -1.71
SOX1O00570 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.34□□□□□ -1.71
SOX1O00570 RNA5SP120-201ENST00000410900 112 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.34□□□□□ -1.71
SOX1O00570 AL390729.2-201ENST00000416137 156 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AC073901.1-201ENST00000462471 408 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AL133162.1-201ENST00000463228 453 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AC008155.2-201ENST00000464337 397 ntBASIC4.34□□□□□ -1.71
SOX1O00570 RN7SKP49-201ENST00000516675 260 ntBASIC4.34□□□□□ -1.71
SOX1O00570 RNU7-110P-201ENST00000516891 62 ntBASIC4.34□□□□□ -1.71
SOX1O00570 RNU6-703P-201ENST00000516946 107 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AC022559.1-201ENST00000520905 205 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX1O00570 AP004607.1-201ENST00000524456 203 ntBASIC4.34□□□□□ -1.71
SOX1O00570 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.34□□□□□ -1.71
SOX1O00570 MIR4423-201ENST00000580922 80 ntBASIC4.34□□□□□ -1.71
SOX1O00570 MIR4472-2-201ENST00000582069 67 ntBASIC4.34□□□□□ -1.71
SOX1O00570 AC004832.4-201ENST00000608952 331 ntBASIC4.34□□□□□ -1.71
SOX1O00570 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.34□□□□□ -1.71
SOX1O00570 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
SOX1O00570 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.34□□□□□ -1.72
SOX1O00570 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SOX1O00570 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.72
SOX1O00570 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SOX1O00570 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 AC118273.1-201ENST00000525324 3006 ntBASIC4.33□□□□□ -1.72
SOX1O00570 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 Z82217.1-201ENST00000625157 8149 ntBASIC4.33□□□□□ -1.72
SOX1O00570 SNORA25.1-201ENST00000362326 128 ntBASIC4.33□□□□□ -1.72
SOX1O00570 RNU6-704P-201ENST00000364162 103 ntBASIC4.33□□□□□ -1.72
SOX1O00570 SNORD50.2-201ENST00000365465 70 ntBASIC4.33□□□□□ -1.72
SOX1O00570 SNORA3.3-201ENST00000408712 125 ntBASIC4.33□□□□□ -1.72
SOX1O00570 RNU6-1245P-201ENST00000411130 106 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX1O00570 Z82210.1-201ENST00000440037 231 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AC096638.1-201ENST00000444678 216 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AL031659.1-201ENST00000447075 539 ntBASIC4.33□□□□□ -1.72
SOX1O00570 Y_RNA.638-201ENST00000459374 113 ntBASIC4.33□□□□□ -1.72
SOX1O00570 RPL21P104-201ENST00000464143 478 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AC087477.1-201ENST00000465747 340 ntBASIC4.33□□□□□ -1.72
SOX1O00570 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 CYCSP39-201ENST00000565821 309 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AC011921.3-201ENST00000605540 361 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AC005296.1-201ENST00000616145 209 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AL590240.4-201ENST00000616908 390 ntBASIC4.33□□□□□ -1.72
SOX1O00570 AL049781.1-201ENST00000623195 3585 ntBASIC4.33□□□□□ -1.72
SOX1O00570 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.33□□□□□ -1.72
SOX1O00570 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SOX1O00570 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SOX1O00570 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX1O00570 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX1O00570 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.32□□□□□ -1.72
SOX1O00570 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.82-201ENST00000363000 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.92-201ENST00000363043 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 RNU6-626P-201ENST00000363354 107 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.235-201ENST00000364412 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.306-201ENST00000365015 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.312-201ENST00000365089 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.322-201ENST00000365151 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 RNU6-142P-201ENST00000384019 107 ntBASIC4.32□□□□□ -1.72
SOX1O00570 RNU6-514P-201ENST00000384208 107 ntBASIC4.32□□□□□ -1.72
SOX1O00570 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX1O00570 RPL19P1-201ENST00000411635 428 ntBASIC4.32□□□□□ -1.72
SOX1O00570 TOMM22P1-201ENST00000418578 312 ntBASIC4.32□□□□□ -1.72
SOX1O00570 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.32□□□□□ -1.72
SOX1O00570 CKS1BP6-201ENST00000424932 240 ntBASIC4.32□□□□□ -1.72
SOX1O00570 AC243964.1-201ENST00000441814 261 ntBASIC4.32□□□□□ -1.72
SOX1O00570 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.650-201ENST00000459002 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 SNORD108-201ENST00000459332 71 ntBASIC4.32□□□□□ -1.72
SOX1O00570 AC091021.1-201ENST00000468051 388 ntBASIC4.32□□□□□ -1.72
SOX1O00570 AC025518.1-201ENST00000479856 347 ntBASIC4.32□□□□□ -1.72
SOX1O00570 AF186996.7-201ENST00000492781 209 ntBASIC4.32□□□□□ -1.72
SOX1O00570 RN7SKP18-201ENST00000516005 275 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.777-201ENST00000516982 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.32□□□□□ -1.72
SOX1O00570 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX1O00570 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.32□□□□□ -1.72
SOX1O00570 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.771-201ENST00000598668 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 AL356157.2-201ENST00000605122 111 ntBASIC4.32□□□□□ -1.72
SOX1O00570 Y_RNA.789-201ENST00000622480 102 ntBASIC4.32□□□□□ -1.72
SOX1O00570 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
SOX1O00570 SRP72P2-201ENST00000344851 1979 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms