Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.53□□□□□ -2.16
DFFAO00273 GDI2P2-201ENST00000445131 608 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.53□□□□□ -2.16
DFFAO00273 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AP003392.2-201ENST00000527269 208 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AP005435.4-201ENST00000529514 284 ntBASIC1.53□□□□□ -2.16
DFFAO00273 CR383656.8-201ENST00000549046 145 ntBASIC1.53□□□□□ -2.16
DFFAO00273 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.16
DFFAO00273 MIR4524B-201ENST00000581569 115 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.53□□□□□ -2.16
DFFAO00273 BNIP3P25-201ENST00000596023 559 ntBASIC1.53□□□□□ -2.16
DFFAO00273 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.53□□□□□ -2.16
DFFAO00273 AC090517.3-201ENST00000625170 141 ntBASIC1.53□□□□□ -2.16
DFFAO00273 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
DFFAO00273 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
DFFAO00273 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
DFFAO00273 RNU6-529P-201ENST00000363383 104 ntBASIC1.52□□□□□ -2.17
DFFAO00273 RNU6-457P-201ENST00000363999 107 ntBASIC1.52□□□□□ -2.17
DFFAO00273 RNU6-611P-201ENST00000384276 104 ntBASIC1.52□□□□□ -2.17
DFFAO00273 RNA5SP212-201ENST00000391223 107 ntBASIC1.52□□□□□ -2.17
DFFAO00273 MIR1262-201ENST00000408276 93 ntBASIC1.52□□□□□ -2.17
DFFAO00273 RNU2-32P-201ENST00000411193 191 ntBASIC1.52□□□□□ -2.17
DFFAO00273 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.52□□□□□ -2.17
DFFAO00273 NDUFB1P2-201ENST00000449477 176 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AL009048.1-201ENST00000450437 298 ntBASIC1.52□□□□□ -2.17
DFFAO00273 snoU109.2-201ENST00000459316 135 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AL121594.1-201ENST00000475906 575 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AP001025.1-201ENST00000486139 332 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AC112206.3-201ENST00000514578 389 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AC116347.2-201ENST00000514912 523 ntBASIC1.52□□□□□ -2.17
DFFAO00273 SNORA31.24-201ENST00000517232 57 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AC022254.1-201ENST00000567857 235 ntBASIC1.52□□□□□ -2.17
DFFAO00273 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
DFFAO00273 MIR3118-1-201ENST00000581787 76 ntBASIC1.52□□□□□ -2.17
DFFAO00273 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.52□□□□□ -2.17
DFFAO00273 AC105148.1-201ENST00000604961 409 ntBASIC1.52□□□□□ -2.17
DFFAO00273 AC012360.2-201ENST00000609349 391 ntBASIC1.52□□□□□ -2.17
DFFAO00273 Z82243.1-201ENST00000609432 473 ntBASIC1.52□□□□□ -2.17
DFFAO00273 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.52□□□□□ -2.17
DFFAO00273 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.52□□□□□ -2.17
DFFAO00273 FARSBP1-201ENST00000435808 1778 ntBASIC1.52□□□□□ -2.17
DFFAO00273 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
DFFAO00273 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.51□□□□□ -2.17
DFFAO00273 Y_RNA.18-201ENST00000362461 102 ntBASIC1.51□□□□□ -2.17
DFFAO00273 RNU6-655P-201ENST00000362858 107 ntBASIC1.51□□□□□ -2.17
DFFAO00273 SNORD14B-201ENST00000364533 90 ntBASIC1.51□□□□□ -2.17
DFFAO00273 RNU6-546P-201ENST00000383991 107 ntBASIC1.51□□□□□ -2.17
DFFAO00273 RNU6-809P-201ENST00000384461 107 ntBASIC1.51□□□□□ -2.17
DFFAO00273 SNORA67.5-201ENST00000391036 107 ntBASIC1.51□□□□□ -2.17
DFFAO00273 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
DFFAO00273 RNU6-174P-201ENST00000410406 106 ntBASIC1.51□□□□□ -2.17
DFFAO00273 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
DFFAO00273 RPL22P18-201ENST00000417197 377 ntBASIC1.51□□□□□ -2.17
DFFAO00273 RPS15AP12-201ENST00000419498 388 ntBASIC1.51□□□□□ -2.17
DFFAO00273 RPL22P17-201ENST00000438729 315 ntBASIC1.51□□□□□ -2.17
DFFAO00273 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.51□□□□□ -2.17
DFFAO00273 PRELID3BP1-201ENST00000457142 540 ntBASIC1.51□□□□□ -2.17
DFFAO00273 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
DFFAO00273 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
DFFAO00273 RNU7-51P-201ENST00000516560 62 ntBASIC1.51□□□□□ -2.17
DFFAO00273 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.51□□□□□ -2.17
DFFAO00273 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.51□□□□□ -2.17
DFFAO00273 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.51□□□□□ -2.17
DFFAO00273 AC022880.1-201ENST00000534017 973 ntBASIC1.51□□□□□ -2.17
DFFAO00273 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.51□□□□□ -2.17
DFFAO00273 MTND4P33-201ENST00000556706 766 ntBASIC1.51□□□□□ -2.17
DFFAO00273 MIR4713-201ENST00000582691 75 ntBASIC1.51□□□□□ -2.17
DFFAO00273 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.51□□□□□ -2.17
DFFAO00273 AL138889.2-201ENST00000603883 242 ntBASIC1.51□□□□□ -2.17
DFFAO00273 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.51□□□□□ -2.17
DFFAO00273 AL359547.2-201ENST00000615810 418 ntBASIC1.51□□□□□ -2.17
DFFAO00273 AL132822.1-201ENST00000617063 513 ntBASIC1.51□□□□□ -2.17
DFFAO00273 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
DFFAO00273 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
DFFAO00273 Y_RNA.40-201ENST00000362645 93 ntBASIC1.5□□□□□ -2.17
DFFAO00273 RNU6-1210P-201ENST00000363775 107 ntBASIC1.5□□□□□ -2.17
DFFAO00273 SNORD14D-201ENST00000384390 87 ntBASIC1.5□□□□□ -2.17
DFFAO00273 MIR10A-201ENST00000385043 110 ntBASIC1.5□□□□□ -2.17
DFFAO00273 MIR320A-201ENST00000385302 82 ntBASIC1.5□□□□□ -2.17
DFFAO00273 RNU2-23P-201ENST00000410545 195 ntBASIC1.5□□□□□ -2.17
DFFAO00273 RPS27AP14-201ENST00000422868 454 ntBASIC1.5□□□□□ -2.17
DFFAO00273 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.5□□□□□ -2.17
DFFAO00273 MTCO2P23-201ENST00000425216 680 ntBASIC1.5□□□□□ -2.17
DFFAO00273 RPL37P21-201ENST00000435890 276 ntBASIC1.5□□□□□ -2.17
DFFAO00273 CALM1P1-201ENST00000442082 433 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AC104058.1-201ENST00000448028 297 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AC245102.2-201ENST00000448956 180 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.5□□□□□ -2.17
DFFAO00273 RN7SKP256-201ENST00000517201 314 ntBASIC1.5□□□□□ -2.17
DFFAO00273 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.5□□□□□ -2.17
DFFAO00273 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.5□□□□□ -2.17
DFFAO00273 ZNF519P3-201ENST00000557158 1032 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AC103987.3-201ENST00000582071 292 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
DFFAO00273 AL670379.2-201ENST00000604983 252 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AL670379.4-201ENST00000605279 254 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AP002360.4-201ENST00000606980 481 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AL031667.3-201ENST00000620124 655 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AC093648.1-201ENST00000623546 606 ntBASIC1.5□□□□□ -2.17
DFFAO00273 AC010608.3-201ENST00000625048 527 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms