Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 RNU11-2P-201ENST00000516898 142 ntBASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 AL049870.4-201ENST00000555741 486 ntBASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 RPL23AP91-201ENST00000569211 455 ntBASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 AL365434.2-201ENST00000607979 234 ntBASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
LINC01546A6NGU7 SNORD3E-201ENST00000362899 217 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 RNU6-288P-201ENST00000363690 104 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 U8.7-201ENST00000364940 136 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 MIR95-201ENST00000385072 81 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 AL049734.2-201ENST00000441066 616 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 AC024060.1-201ENST00000607052 494 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 AC013468.1-201ENST00000608680 598 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 AL049641.1-201ENST00000441055 1948 ntBASIC-0.38□□□□□ -2.47
LINC01546A6NGU7 RNU4-79P-201ENST00000362764 141 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 SNORD114-31-201ENST00000363219 75 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 RNU6-923P-201ENST00000364753 107 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 RN7SKP200-201ENST00000410564 320 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AC018630.2-202ENST00000422992 927 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AC092436.3-201ENST00000511788 257 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 IGLVI-20-201ENST00000519296 130 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AL158211.1-201ENST00000566763 763 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 MIR3921-201ENST00000577308 85 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AL391813.1-201ENST00000603098 260 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AC007349.4-201ENST00000608114 532 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 AC078938.1-201ENST00000620993 318 ntBASIC-0.39□□□□□ -2.47
LINC01546A6NGU7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 Z75746.1-201ENST00000440243 2080 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 RNA5SP275-201ENST00000363936 118 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 MIR329-2-201ENST00000385029 84 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC005534.2-201ENST00000431047 433 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC243964.1-201ENST00000441814 261 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 VPS26AP1-201ENST00000483197 979 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 SNORD79.1-201ENST00000516069 84 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC067904.2-201ENST00000517322 1283 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC124293.1-201ENST00000530034 493 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 NACAP3-201ENST00000552100 481 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC027104.1-201ENST00000563702 681 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC005730.3-201ENST00000583067 366 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC092447.9-201ENST00000603395 144 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 AC067863.3-201ENST00000624172 122 ntBASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
LINC01546A6NGU7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.41□□□□□ -2.47
LINC01546A6NGU7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 SNORA36.2-201ENST00000384004 127 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 SNORD12-201ENST00000391002 90 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 TAAR7P-201ENST00000436141 242 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC016717.1-201ENST00000448918 286 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 SMURF2P1-201ENST00000514992 481 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC006199.1-201ENST00000548728 219 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AL357094.1-201ENST00000603845 844 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AL360219.1-201ENST00000610230 366 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 AL159152.1-201ENST00000635019 2587 ntBASIC-0.41□□□□□ -2.48
LINC01546A6NGU7 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms